Gene
RNA
| Item | Value |
|---|---|
| gene id | G1729359 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 33309524 ~ 33309744 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1980838 | True | 221 | lncRNA | 0.42 | 1 | 33309524 | 33309744 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500282 | LOC106609111 | coding | upstream | 56001 | 33180674 ~ 33253523 (+) |
| LOC110501067 | LOC106609112 | coding | upstream | 142833 | 33054060 ~ 33166691 (+) |
| LOC110500281 | trmu | coding | upstream | 256017 | 33050475 ~ 33053507 (+) |
| LOC110500279 | LOC106609114 | coding | upstream | 351721 | 32841789 ~ 32957803 (+) |
| LOC110500278 | LOC106609115 | coding | upstream | 474566 | 32793210 ~ 32834958 (+) |
| LOC110500284 | LOC106609109 | coding | downstream | 20183 | 33329927 ~ 33515988 (+) |
| LOC110500285 | fam19a5 | coding | downstream | 399717 | 33709461 ~ 33869016 (+) |
| LOC110500288 | LOC106609107 | coding | downstream | 999355 | 34309099 ~ 34317797 (+) |
| LOC100135927 | LOC106609106 | coding | downstream | 1015466 | 34325210 ~ 34329578 (+) |
| LOC110500293 | LOC106609102 | coding | downstream | 1456976 | 34766720 ~ 34782583 (+) |
| G1729352 | NA | non-coding | upstream | 15577 | 33293708 ~ 33293947 (+) |
| G1729348 | NA | non-coding | upstream | 24279 | 33284691 ~ 33285245 (+) |
| G1729344 | NA | non-coding | upstream | 33257 | 33276047 ~ 33276267 (+) |
| G1729338 | NA | non-coding | upstream | 38668 | 33270626 ~ 33270856 (+) |
| G1729333 | NA | non-coding | upstream | 44392 | 33264894 ~ 33265132 (+) |
| G1729462 | NA | non-coding | downstream | 9080 | 33318824 ~ 33319046 (+) |
| G1729577 | NA | non-coding | downstream | 164091 | 33473835 ~ 33474330 (+) |
| G1729617 | NA | non-coding | downstream | 226133 | 33535877 ~ 33536136 (+) |
| G1729769 | NA | non-coding | downstream | 230200 | 33539944 ~ 33540150 (+) |
| G1729781 | NA | non-coding | downstream | 235734 | 33545478 ~ 33545693 (+) |
| LOC110500252 | LOC106609149 | other | upstream | 1147132 | 32153116 ~ 32162456 (+) |
| LOC110501063 | LOC106609150 | other | upstream | 1172828 | 32114413 ~ 32144886 (+) |
| G1727220 | NA | other | upstream | 1744930 | 31564135 ~ 31564594 (+) |
| G1727181 | NA | other | upstream | 1801152 | 31508056 ~ 31508372 (+) |
| G1727146 | NA | other | upstream | 1859407 | 31449396 ~ 31450117 (+) |
| G1729465 | NA | other | downstream | 11709 | 33321453 ~ 33321761 (+) |
| G1732028 | NA | other | downstream | 2129545 | 35439289 ~ 35484354 (+) |
| G1732735 | NA | other | downstream | 2731587 | 36041331 ~ 36042488 (+) |
| LOC110500325 | ppp2r5b | other | downstream | 2923378 | 36189389 ~ 36237829 (+) |
