Gene
RNA
| Item | Value |
|---|---|
| gene id | G1729788 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 33552977 ~ 33553203 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1981286 | True | 227 | lncRNA | 0.48 | 1 | 33552977 | 33553203 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500284 | LOC106609109 | coding | upstream | 36989 | 33329927 ~ 33515988 (+) |
| LOC110500282 | LOC106609111 | coding | upstream | 299454 | 33180674 ~ 33253523 (+) |
| LOC110501067 | LOC106609112 | coding | upstream | 386286 | 33054060 ~ 33166691 (+) |
| LOC110500281 | trmu | coding | upstream | 499470 | 33050475 ~ 33053507 (+) |
| LOC110500279 | LOC106609114 | coding | upstream | 595174 | 32841789 ~ 32957803 (+) |
| LOC110500285 | fam19a5 | coding | downstream | 156258 | 33709461 ~ 33869016 (+) |
| LOC110500288 | LOC106609107 | coding | downstream | 755896 | 34309099 ~ 34317797 (+) |
| LOC100135927 | LOC106609106 | coding | downstream | 772007 | 34325210 ~ 34329578 (+) |
| LOC110500293 | LOC106609102 | coding | downstream | 1213517 | 34766720 ~ 34782583 (+) |
| LOC118942784 | NA | coding | downstream | 1231210 | 34784413 ~ 34792564 (+) |
| G1729782 | NA | non-coding | upstream | 6863 | 33545900 ~ 33546114 (+) |
| G1729781 | NA | non-coding | upstream | 7284 | 33545478 ~ 33545693 (+) |
| G1729769 | NA | non-coding | upstream | 12827 | 33539944 ~ 33540150 (+) |
| G1729617 | NA | non-coding | upstream | 16841 | 33535877 ~ 33536136 (+) |
| G1729577 | NA | non-coding | upstream | 78647 | 33473835 ~ 33474330 (+) |
| G1729789 | NA | non-coding | downstream | 21 | 33553224 ~ 33553486 (+) |
| G1729803 | NA | non-coding | downstream | 10659 | 33563862 ~ 33564130 (+) |
| G1729837 | NA | non-coding | downstream | 56485 | 33609688 ~ 33609995 (+) |
| G1729865 | NA | non-coding | downstream | 85048 | 33638251 ~ 33643212 (+) |
| G1729923 | NA | non-coding | downstream | 105400 | 33658603 ~ 33658826 (+) |
| G1729465 | NA | other | upstream | 231216 | 33321453 ~ 33321761 (+) |
| LOC110500252 | LOC106609149 | other | upstream | 1390585 | 32153116 ~ 32162456 (+) |
| LOC110501063 | LOC106609150 | other | upstream | 1416281 | 32114413 ~ 32144886 (+) |
| G1727220 | NA | other | upstream | 1988383 | 31564135 ~ 31564594 (+) |
| G1727181 | NA | other | upstream | 2044605 | 31508056 ~ 31508372 (+) |
| G1732028 | NA | other | downstream | 1886086 | 35439289 ~ 35484354 (+) |
| G1732735 | NA | other | downstream | 2488128 | 36041331 ~ 36042488 (+) |
| LOC110500325 | ppp2r5b | other | downstream | 2679919 | 36189389 ~ 36237829 (+) |
| G1733187 | NA | other | downstream | 3203786 | 36756989 ~ 36760221 (+) |
