Gene
RNA
| Item | Value |
|---|---|
| gene id | G1730354 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 33950492 ~ 33950910 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1981883 | True | 419 | lncRNA | 0.37 | 1 | 33950492 | 33950910 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500285 | fam19a5 | coding | upstream | 81476 | 33709461 ~ 33869016 (+) |
| LOC110500284 | LOC106609109 | coding | upstream | 434504 | 33329927 ~ 33515988 (+) |
| LOC110500282 | LOC106609111 | coding | upstream | 696969 | 33180674 ~ 33253523 (+) |
| LOC110501067 | LOC106609112 | coding | upstream | 783801 | 33054060 ~ 33166691 (+) |
| LOC110500281 | trmu | coding | upstream | 896985 | 33050475 ~ 33053507 (+) |
| LOC110500288 | LOC106609107 | coding | downstream | 358189 | 34309099 ~ 34317797 (+) |
| LOC100135927 | LOC106609106 | coding | downstream | 374300 | 34325210 ~ 34329578 (+) |
| LOC110500293 | LOC106609102 | coding | downstream | 815810 | 34766720 ~ 34782583 (+) |
| LOC118942784 | NA | coding | downstream | 833503 | 34784413 ~ 34792564 (+) |
| LOC110501070 | wnt7b | coding | downstream | 966782 | 34917692 ~ 34931171 (+) |
| G1730325 | NA | non-coding | upstream | 25413 | 33924816 ~ 33925079 (+) |
| G1730296 | NA | non-coding | upstream | 47607 | 33902647 ~ 33902885 (+) |
| G1729923 | NA | non-coding | upstream | 291666 | 33658603 ~ 33658826 (+) |
| G1729865 | NA | non-coding | upstream | 307280 | 33638251 ~ 33643212 (+) |
| G1730393 | NA | non-coding | downstream | 28444 | 33979354 ~ 33979570 (+) |
| G1730404 | NA | non-coding | downstream | 35663 | 33986573 ~ 33986790 (+) |
| G1730409 | NA | non-coding | downstream | 38375 | 33989285 ~ 33989485 (+) |
| G1730410 | NA | non-coding | downstream | 39438 | 33990348 ~ 33990674 (+) |
| G1730422 | NA | non-coding | downstream | 48875 | 33999785 ~ 34000132 (+) |
| G1729465 | NA | other | upstream | 628731 | 33321453 ~ 33321761 (+) |
| LOC110500252 | LOC106609149 | other | upstream | 1788100 | 32153116 ~ 32162456 (+) |
| LOC110501063 | LOC106609150 | other | upstream | 1813796 | 32114413 ~ 32144886 (+) |
| G1727220 | NA | other | upstream | 2385898 | 31564135 ~ 31564594 (+) |
| G1732028 | NA | other | downstream | 1488379 | 35439289 ~ 35484354 (+) |
| G1732735 | NA | other | downstream | 2090421 | 36041331 ~ 36042488 (+) |
| LOC110500325 | ppp2r5b | other | downstream | 2282212 | 36189389 ~ 36237829 (+) |
| G1733187 | NA | other | downstream | 2806079 | 36756989 ~ 36760221 (+) |
| zgc:109889 | LOC100194703 | other | downstream | 3297717 | 37248296 ~ 37314293 (+) |
