G1730384


Basic Information

Item Value
gene id G1730384
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 33971546 ~ 33972460 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1981913
ATTACGCACGTTCACGTGAGAGGCAGCTCCGTTCCATCGCTCATTTGAAGTCAAtgtaattctccggttggaaagTTATTCAAGATGTatgttaacctgttagatctctaggggcgctatttcatttttggataaaaaacgttcccgttttaagcgcgatattttgtcacgaaaagatgctcgactatgcatattcttgacagttttggaaagaaaacactctgaagtttcagaatctgcaaagattttgtctgtaagtgccccagaactcattttacaggcgaaaccaagatgatgcatcaaccaggaattagcagaatttctgaagctctgttttccattgtctccttatatggctgtgattgcgcaaggaatgagcctacactttctgtcgttcgcccaaggtcttagcagcattgtgacgtatttgtaggcatatcattggaagattgaccataagagactacattttccaagtgtccgcctggtgtcctgcgtggaattcggtgcgcaattgccagctgcttttactttaccatttgattcaggggagaaagcatgtgtccaagaacgatgtatcaatgaagagatatgtgaaaaacaccttgatgattgattctaaacaacgtttgccatgttttcagtcgatattatggagttaatttggaaaaaagttcgcgttttgaggactgaattttcgttttttttttggtagccaaatgtgatgtataaaacggagctatttctaatacacaaagaatctttttggaaaaactgagcatctgctatctaactgagtctcctcattgaaaacatcagaagttcttcaaaggtaaatgattttatttgaaggcttttatgtttttgttgaaatgttgcgtgctggatgctaacgctaatgctaacgctaaatgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1981913 True 915 lncRNA 0.39 1 33971546 33972460

Neighbor

gene id symbol gene type direction distance location
LOC118942783 NA coding downstream 667180 33300216 ~ 33304366 (-)
LOC110500280 LOC106609113 coding downstream 930738 33037901 ~ 33040808 (-)
LOC118942920 NA coding downstream 1129601 32834421 ~ 32841945 (-)
LOC110500274 cssa07h12orf40 coding downstream 1203707 32755608 ~ 32767839 (-)
LOC110500273 LOC106609119 coding downstream 1281783 32679894 ~ 32689763 (-)
LOC110501068 LOC106575995 coding upstream 297801 34269811 ~ 34288000 (-)
LOC118936404 LOC106575995 coding upstream 315616 34288076 ~ 34292270 (-)
LOC110500287 NA coding upstream 319606 34292066 ~ 34295197 (-)
LOC110500289 LOC106609155 coding upstream 345812 34318272 ~ 34325044 (-)
LOC110500290 LOC106609105 coding upstream 399770 34372230 ~ 34376541 (-)
G1730381 NA non-coding downstream 2815 33968517 ~ 33968731 (-)
G1730373 NA non-coding downstream 7889 33963441 ~ 33963657 (-)
G1730355 NA non-coding downstream 20592 33950492 ~ 33950954 (-)
G1730353 NA non-coding downstream 21660 33949672 ~ 33949886 (-)
G1730324 NA non-coding downstream 46799 33924465 ~ 33924747 (-)
G1730427 NA non-coding upstream 29528 34001988 ~ 34002260 (-)
G1730428 NA non-coding upstream 30636 34003096 ~ 34003422 (-)
G1730432 NA non-coding upstream 32635 34005095 ~ 34005945 (-)
G1730436 NA non-coding upstream 37945 34010405 ~ 34010625 (-)
G1730438 NA non-coding upstream 39321 34011781 ~ 34011994 (-)
LOC110500269 LOC106609159 other downstream 1366916 32603262 ~ 32604698 (-)
LOC110500257 LOC106576032 other downstream 1701885 32254847 ~ 32269661 (-)
G1728665 NA other downstream 1802612 32167669 ~ 32168934 (-)
G1727426 LOC107662719 other downstream 2372057 31599146 ~ 31599489 (-)
G1727354 NA other downstream 2479244 31491520 ~ 31492302 (-)
G1730761 NA other upstream 352765 34325225 ~ 34329576 (-)
G1731156 NA other upstream 584720 34555871 ~ 34565175 (-)
G1731328 LOC106609102 other upstream 801006 34773466 ~ 34773878 (-)

Expression

G1730384 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 8.
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G1730384 Expression in each Bioproject

Bar chart with 17 bars.
G1730384 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
End of interactive chart.

Co-expression Network