G1730409


Basic Information

Item Value
gene id G1730409
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 33989285 ~ 33989485 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1981938
tgctgtacactggaccctatgatcacttggctacatagctgatgcctgctggactgttcatttatCACGGTACTCCACTTTGTTTACCTTTGTTTATATGTCGGCCcgagcctcgaactcaggccctgcgtgtagttaaccgaccctctctgcccattcattgccattttacctgttgttgttgtcttagctgattagctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1981938 True 201 lncRNA 0.48 1 33989285 33989485

Neighbor

gene id symbol gene type direction distance location
LOC110500285 fam19a5 coding upstream 120269 33709461 ~ 33869016 (+)
LOC110500284 LOC106609109 coding upstream 473297 33329927 ~ 33515988 (+)
LOC110500282 LOC106609111 coding upstream 735762 33180674 ~ 33253523 (+)
LOC110501067 LOC106609112 coding upstream 822594 33054060 ~ 33166691 (+)
LOC110500281 trmu coding upstream 935778 33050475 ~ 33053507 (+)
LOC110500288 LOC106609107 coding downstream 319614 34309099 ~ 34317797 (+)
LOC100135927 LOC106609106 coding downstream 335725 34325210 ~ 34329578 (+)
LOC110500293 LOC106609102 coding downstream 777235 34766720 ~ 34782583 (+)
LOC118942784 NA coding downstream 794928 34784413 ~ 34792564 (+)
LOC110501070 wnt7b coding downstream 928207 34917692 ~ 34931171 (+)
G1730404 NA non-coding upstream 2495 33986573 ~ 33986790 (+)
G1730393 NA non-coding upstream 9715 33979354 ~ 33979570 (+)
G1730354 NA non-coding upstream 38375 33950492 ~ 33950910 (+)
G1730325 NA non-coding upstream 64206 33924816 ~ 33925079 (+)
G1730296 NA non-coding upstream 86400 33902647 ~ 33902885 (+)
G1730410 NA non-coding downstream 863 33990348 ~ 33990674 (+)
G1730422 NA non-coding downstream 10300 33999785 ~ 34000132 (+)
G1730426 NA non-coding downstream 12395 34001880 ~ 34002355 (+)
G1730439 NA non-coding downstream 23432 34012917 ~ 34013362 (+)
G1730442 NA non-coding downstream 24042 34013527 ~ 34018689 (+)
G1729465 NA other upstream 667524 33321453 ~ 33321761 (+)
LOC110500252 LOC106609149 other upstream 1826893 32153116 ~ 32162456 (+)
LOC110501063 LOC106609150 other upstream 1852589 32114413 ~ 32144886 (+)
G1727220 NA other upstream 2424691 31564135 ~ 31564594 (+)
G1732028 NA other downstream 1449804 35439289 ~ 35484354 (+)
G1732735 NA other downstream 2051846 36041331 ~ 36042488 (+)
LOC110500325 ppp2r5b other downstream 2243637 36189389 ~ 36237829 (+)
G1733187 NA other downstream 2767504 36756989 ~ 36760221 (+)
zgc:109889 LOC100194703 other downstream 3259142 37248296 ~ 37314293 (+)

Expression


Co-expression Network