Gene
RNA
| Item | Value |
|---|---|
| gene id | G1730439 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 34012917 ~ 34013362 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1981968 | True | 446 | lncRNA | 0.39 | 1 | 34012917 | 34013362 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500285 | fam19a5 | coding | upstream | 143901 | 33709461 ~ 33869016 (+) |
| LOC110500284 | LOC106609109 | coding | upstream | 496929 | 33329927 ~ 33515988 (+) |
| LOC110500282 | LOC106609111 | coding | upstream | 759394 | 33180674 ~ 33253523 (+) |
| LOC110501067 | LOC106609112 | coding | upstream | 846226 | 33054060 ~ 33166691 (+) |
| LOC110500281 | trmu | coding | upstream | 959410 | 33050475 ~ 33053507 (+) |
| LOC110500288 | LOC106609107 | coding | downstream | 295737 | 34309099 ~ 34317797 (+) |
| LOC100135927 | LOC106609106 | coding | downstream | 311848 | 34325210 ~ 34329578 (+) |
| LOC110500293 | LOC106609102 | coding | downstream | 753358 | 34766720 ~ 34782583 (+) |
| LOC118942784 | NA | coding | downstream | 771051 | 34784413 ~ 34792564 (+) |
| LOC110501070 | wnt7b | coding | downstream | 904330 | 34917692 ~ 34931171 (+) |
| G1730426 | NA | non-coding | upstream | 10562 | 34001880 ~ 34002355 (+) |
| G1730422 | NA | non-coding | upstream | 12785 | 33999785 ~ 34000132 (+) |
| G1730410 | NA | non-coding | upstream | 22243 | 33990348 ~ 33990674 (+) |
| G1730409 | NA | non-coding | upstream | 23432 | 33989285 ~ 33989485 (+) |
| G1730404 | NA | non-coding | upstream | 26127 | 33986573 ~ 33986790 (+) |
| G1730442 | NA | non-coding | downstream | 165 | 34013527 ~ 34018689 (+) |
| G1730490 | NA | non-coding | downstream | 68812 | 34082174 ~ 34112788 (+) |
| G1730581 | NA | non-coding | downstream | 105634 | 34118996 ~ 34119376 (+) |
| G1730651 | NA | non-coding | downstream | 155932 | 34169294 ~ 34218724 (+) |
| G1730744 | NA | non-coding | downstream | 283807 | 34297169 ~ 34297702 (+) |
| G1729465 | NA | other | upstream | 691156 | 33321453 ~ 33321761 (+) |
| LOC110500252 | LOC106609149 | other | upstream | 1850525 | 32153116 ~ 32162456 (+) |
| LOC110501063 | LOC106609150 | other | upstream | 1876221 | 32114413 ~ 32144886 (+) |
| G1727220 | NA | other | upstream | 2448323 | 31564135 ~ 31564594 (+) |
| G1732028 | NA | other | downstream | 1425927 | 35439289 ~ 35484354 (+) |
| G1732735 | NA | other | downstream | 2027969 | 36041331 ~ 36042488 (+) |
| LOC110500325 | ppp2r5b | other | downstream | 2219760 | 36189389 ~ 36237829 (+) |
| G1733187 | NA | other | downstream | 2743627 | 36756989 ~ 36760221 (+) |
| zgc:109889 | LOC100194703 | other | downstream | 3235265 | 37248296 ~ 37314293 (+) |
