G1730490


Basic Information

Item Value
gene id G1730490
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 34082174 ~ 34112788 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1982029
atatctcaaagtgctgtacagaaaccctaaaaccccaaacagcaagcaatgcaggtgtagaagcacggtggctaggaaaaactcccatgaaaggccaaaacctaggaagaaacctagagaggaaccaggctatgtggggtggccagtcctcttctggctgtgccgggtggagattataacagaacatggccaagatgtgcaaatgttcataaatgaccagcatggtcaaataataataatcacaggcagaacagtttaaactggagcagcagcacggccaggtggactgaggacagcaaagag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1982029 True 303 lncRNA 0.48 2 34082174 34112788

Neighbor

gene id symbol gene type direction distance location
LOC110500285 fam19a5 coding upstream 213158 33709461 ~ 33869016 (+)
LOC110500284 LOC106609109 coding upstream 566186 33329927 ~ 33515988 (+)
LOC110500282 LOC106609111 coding upstream 828651 33180674 ~ 33253523 (+)
LOC110501067 LOC106609112 coding upstream 915483 33054060 ~ 33166691 (+)
LOC110500281 trmu coding upstream 1028667 33050475 ~ 33053507 (+)
LOC110500288 LOC106609107 coding downstream 196311 34309099 ~ 34317797 (+)
LOC100135927 LOC106609106 coding downstream 212422 34325210 ~ 34329578 (+)
LOC110500293 LOC106609102 coding downstream 653932 34766720 ~ 34782583 (+)
LOC118942784 NA coding downstream 671625 34784413 ~ 34792564 (+)
LOC110501070 wnt7b coding downstream 804904 34917692 ~ 34931171 (+)
G1730442 NA non-coding upstream 63485 34013527 ~ 34018689 (+)
G1730439 NA non-coding upstream 68812 34012917 ~ 34013362 (+)
G1730426 NA non-coding upstream 79819 34001880 ~ 34002355 (+)
G1730422 NA non-coding upstream 82042 33999785 ~ 34000132 (+)
G1730410 NA non-coding upstream 91500 33990348 ~ 33990674 (+)
G1730581 NA non-coding downstream 6208 34118996 ~ 34119376 (+)
G1730651 NA non-coding downstream 56506 34169294 ~ 34218724 (+)
G1730744 NA non-coding downstream 184381 34297169 ~ 34297702 (+)
G1730742 NA non-coding downstream 188880 34301668 ~ 34302513 (+)
G1730741 NA non-coding downstream 192580 34305368 ~ 34306209 (+)
G1729465 NA other upstream 760413 33321453 ~ 33321761 (+)
LOC110500252 LOC106609149 other upstream 1919782 32153116 ~ 32162456 (+)
LOC110501063 LOC106609150 other upstream 1945478 32114413 ~ 32144886 (+)
G1727220 NA other upstream 2517580 31564135 ~ 31564594 (+)
G1732028 NA other downstream 1326501 35439289 ~ 35484354 (+)
G1732735 NA other downstream 1928543 36041331 ~ 36042488 (+)
LOC110500325 ppp2r5b other downstream 2120334 36189389 ~ 36237829 (+)
G1733187 NA other downstream 2644201 36756989 ~ 36760221 (+)
zgc:109889 LOC100194703 other downstream 3135839 37248296 ~ 37314293 (+)

Expression


Co-expression Network