Gene
RNA
| Item | Value |
|---|---|
| gene id | G1730742 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 34301668 ~ 34302513 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1982291 | True | 846 | lncRNA | 0.48 | 1 | 34301668 | 34302513 |
34,298,400
34,298,800
34,299,200
34,299,600
34,300,000
34,300,400
34,300,800
34,301,200
34,301,200
34,301,600
34,302,000
34,302,400
34,302,800
34,303,200
34,303,600
34,304,000
NC_048585.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500285 | fam19a5 | coding | upstream | 432652 | 33709461 ~ 33869016 (+) |
| LOC110500284 | LOC106609109 | coding | upstream | 785680 | 33329927 ~ 33515988 (+) |
| LOC110500282 | LOC106609111 | coding | upstream | 1048145 | 33180674 ~ 33253523 (+) |
| LOC110501067 | LOC106609112 | coding | upstream | 1134977 | 33054060 ~ 33166691 (+) |
| LOC110500281 | trmu | coding | upstream | 1248161 | 33050475 ~ 33053507 (+) |
| LOC110500288 | LOC106609107 | coding | downstream | 6586 | 34309099 ~ 34317797 (+) |
| LOC100135927 | LOC106609106 | coding | downstream | 22697 | 34325210 ~ 34329578 (+) |
| LOC110500293 | LOC106609102 | coding | downstream | 464207 | 34766720 ~ 34782583 (+) |
| LOC118942784 | NA | coding | downstream | 481900 | 34784413 ~ 34792564 (+) |
| LOC110501070 | wnt7b | coding | downstream | 615179 | 34917692 ~ 34931171 (+) |
| G1730744 | NA | non-coding | upstream | 3966 | 34297169 ~ 34297702 (+) |
| G1730651 | NA | non-coding | upstream | 82944 | 34169294 ~ 34218724 (+) |
| G1730581 | NA | non-coding | upstream | 182292 | 34118996 ~ 34119376 (+) |
| G1730490 | NA | non-coding | upstream | 188880 | 34082174 ~ 34112788 (+) |
| G1730442 | NA | non-coding | upstream | 282979 | 34013527 ~ 34018689 (+) |
| G1730741 | NA | non-coding | downstream | 2855 | 34305368 ~ 34306209 (+) |
| G1730746 | NA | non-coding | downstream | 7626 | 34310139 ~ 34310515 (+) |
| G1730861 | NA | non-coding | downstream | 77075 | 34379588 ~ 34379848 (+) |
| G1730866 | NA | non-coding | downstream | 79680 | 34382193 ~ 34382447 (+) |
| G1729465 | NA | other | upstream | 979907 | 33321453 ~ 33321761 (+) |
| LOC110500252 | LOC106609149 | other | upstream | 2139276 | 32153116 ~ 32162456 (+) |
| LOC110501063 | LOC106609150 | other | upstream | 2164972 | 32114413 ~ 32144886 (+) |
| G1727220 | NA | other | upstream | 2737074 | 31564135 ~ 31564594 (+) |
| G1732028 | NA | other | downstream | 1136776 | 35439289 ~ 35484354 (+) |
| G1732735 | NA | other | downstream | 1738818 | 36041331 ~ 36042488 (+) |
| LOC110500325 | ppp2r5b | other | downstream | 1930609 | 36189389 ~ 36237829 (+) |
| G1733187 | NA | other | downstream | 2454476 | 36756989 ~ 36760221 (+) |
| zgc:109889 | LOC100194703 | other | downstream | 2946114 | 37248296 ~ 37314293 (+) |
