G1730741


Basic Information

Item Value
gene id G1730741
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 34305368 ~ 34306209 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1982290
tatgtgggtatctgcttctataaaccaatgaggagatgggagaggcaggacttgcagcacgatctgcgtcagaaatagaactgacttctattttagcccttggcaacgcagacgctcgcgagcagtgtgggtgcaataattgaataatatagatttctacatttattttgaaaCGCTCATGCACACGATGTGAGCGGTGTAGTCAACCTGTTAGAGAAGATTAAAATAATTACAGAGATGTCCTTAATTCTATTGAGGAATAAGTAGGCTATATTTAAGTTGTGATATTGTTAGGAAATGATTAACTGTGTTAAGGCAAATTTGGTTTATTtgaaaataattacattttgttGATAATGAGTTGATAACGTATTGTCCAAAACACGTAGAAAATATTATTTCCTGTGTTGATAGGGGAGTAGGCTAGTGTACAATAATGTAATTTGATGTTctagtattatttatttaatggattaaatacatttgaaatgaaAATATacacattgtcacgccctgatcatagTAAGCTGGTTtttctctgtgttggttggggcgtgatggtgacttgggtgggtcatctaggtacatttttatttctatgttggcctgatatggttcccaatcagagacagctgtttatcgttgtctctgattggggatcatatttaggcagccatttcccctttgtgtttcgtgggatcttgtctatgtttagttgcctgtcagaactatttgtatagcttcacgtttcggtCGTTGATTTAGTTGTTTTTGTTCGGGTTTCATTTATTAaaagagaatgtacgcataccacgctgcgccttggtccattccatacgacg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1982290 True 842 lncRNA 0.38 1 34305368 34306209

Neighbor

gene id symbol gene type direction distance location
LOC110500285 fam19a5 coding upstream 436352 33709461 ~ 33869016 (+)
LOC110500284 LOC106609109 coding upstream 789380 33329927 ~ 33515988 (+)
LOC110500282 LOC106609111 coding upstream 1051845 33180674 ~ 33253523 (+)
LOC110501067 LOC106609112 coding upstream 1138677 33054060 ~ 33166691 (+)
LOC110500281 trmu coding upstream 1251861 33050475 ~ 33053507 (+)
LOC110500288 LOC106609107 coding downstream 2890 34309099 ~ 34317797 (+)
LOC100135927 LOC106609106 coding downstream 19001 34325210 ~ 34329578 (+)
LOC110500293 LOC106609102 coding downstream 460511 34766720 ~ 34782583 (+)
LOC118942784 NA coding downstream 478204 34784413 ~ 34792564 (+)
LOC110501070 wnt7b coding downstream 611483 34917692 ~ 34931171 (+)
G1730742 NA non-coding upstream 2855 34301668 ~ 34302513 (+)
G1730744 NA non-coding upstream 7666 34297169 ~ 34297702 (+)
G1730651 NA non-coding upstream 86644 34169294 ~ 34218724 (+)
G1730581 NA non-coding upstream 185992 34118996 ~ 34119376 (+)
G1730490 NA non-coding upstream 192580 34082174 ~ 34112788 (+)
G1730746 NA non-coding downstream 3930 34310139 ~ 34310515 (+)
G1730861 NA non-coding downstream 73379 34379588 ~ 34379848 (+)
G1730866 NA non-coding downstream 75984 34382193 ~ 34382447 (+)
G1730956 NA non-coding downstream 199033 34505242 ~ 34558860 (+)
G1729465 NA other upstream 983607 33321453 ~ 33321761 (+)
LOC110500252 LOC106609149 other upstream 2142976 32153116 ~ 32162456 (+)
LOC110501063 LOC106609150 other upstream 2168672 32114413 ~ 32144886 (+)
G1727220 NA other upstream 2740774 31564135 ~ 31564594 (+)
G1732028 NA other downstream 1133080 35439289 ~ 35484354 (+)
G1732735 NA other downstream 1735122 36041331 ~ 36042488 (+)
LOC110500325 ppp2r5b other downstream 1926913 36189389 ~ 36237829 (+)
G1733187 NA other downstream 2450780 36756989 ~ 36760221 (+)
zgc:109889 LOC100194703 other downstream 2942418 37248296 ~ 37314293 (+)

Expression


Co-expression Network