G1730861



Basic Information


Item Value
gene id G1730861
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 34379588 ~ 34379848 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1982424
aaaacataggttttcaatttttttctttgaaatgcaagagaaaggccattatATGACTTAGGAGTCTaggcaatttagattttggccactagatggcagcagtgtatgtggaaagttttagactgatccaatgagccattgcatatctgttcaaagTGTTGTAttaagtctgcccaaatgtgcctaattggtttattgatacattttcaagtacataactgtgcactctcctcagacaatagcatggtattctttcacttt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1982424 True 261 lncRNA 0.36 1 34379588 34379848

Neighbor


gene id symbol gene type direction distance location
LOC100135927 LOC106609106 coding upstream 50010 34325210 ~ 34329578 (+)
LOC110500288 LOC106609107 coding upstream 61791 34309099 ~ 34317797 (+)
LOC110500285 fam19a5 coding upstream 510572 33709461 ~ 33869016 (+)
LOC110500284 LOC106609109 coding upstream 863600 33329927 ~ 33515988 (+)
LOC110500282 LOC106609111 coding upstream 1126065 33180674 ~ 33253523 (+)
LOC110500293 LOC106609102 coding downstream 386872 34766720 ~ 34782583 (+)
LOC118942784 NA coding downstream 404565 34784413 ~ 34792564 (+)
LOC110501070 wnt7b coding downstream 537844 34917692 ~ 34931171 (+)
LOC110500295 LOC106609100 coding downstream 649411 35029259 ~ 35033416 (+)
LOC110500296 LOC106609097 coding downstream 691522 35071370 ~ 35267800 (+)
G1730746 NA non-coding upstream 69073 34310139 ~ 34310515 (+)
G1730741 NA non-coding upstream 73379 34305368 ~ 34306209 (+)
G1730742 NA non-coding upstream 77075 34301668 ~ 34302513 (+)
G1730744 NA non-coding upstream 81886 34297169 ~ 34297702 (+)
G1730866 NA non-coding downstream 2345 34382193 ~ 34382447 (+)
G1730956 NA non-coding downstream 125394 34505242 ~ 34558860 (+)
G1730994 NA non-coding downstream 195400 34575248 ~ 34580030 (+)
G1730999 NA non-coding downstream 203359 34583207 ~ 34583466 (+)
G1731003 NA non-coding downstream 208666 34588514 ~ 34588730 (+)
G1729465 NA other upstream 1057827 33321453 ~ 33321761 (+)
LOC110500252 LOC106609149 other upstream 2217196 32153116 ~ 32162456 (+)
LOC110501063 LOC106609150 other upstream 2242892 32114413 ~ 32144886 (+)
G1727220 NA other upstream 2814994 31564135 ~ 31564594 (+)
G1732028 NA other downstream 1059441 35439289 ~ 35484354 (+)
G1732735 NA other downstream 1661483 36041331 ~ 36042488 (+)
LOC110500325 ppp2r5b other downstream 1853274 36189389 ~ 36237829 (+)
G1733187 NA other downstream 2377141 36756989 ~ 36760221 (+)
zgc:109889 LOC100194703 other downstream 2868779 37248296 ~ 37314293 (+)

Expression



Co-expression Network