G1731003


Basic Information

Item Value
gene id G1731003
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 34588514 ~ 34588730 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1982568
aactacaacctaaaacttcttacctgtgaATATTGacgactcatgttaaaaggaaccaccagctttcatatgatCTCATGTTCTGAggaggaactgaaacgttagctttcttacatagcacatattgcacttttactttcttctccaacactttgtttttgcattatttaaaccaaattgaacatgtttcattatctacttgaggctaaattgattt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1982568 True 217 lncRNA 0.33 1 34588514 34588730

Neighbor

gene id symbol gene type direction distance location
LOC100135927 LOC106609106 coding upstream 258936 34325210 ~ 34329578 (+)
LOC110500288 LOC106609107 coding upstream 270717 34309099 ~ 34317797 (+)
LOC110500285 fam19a5 coding upstream 719498 33709461 ~ 33869016 (+)
LOC110500284 LOC106609109 coding upstream 1072526 33329927 ~ 33515988 (+)
LOC110500282 LOC106609111 coding upstream 1334991 33180674 ~ 33253523 (+)
LOC110500293 LOC106609102 coding downstream 177990 34766720 ~ 34782583 (+)
LOC118942784 NA coding downstream 195683 34784413 ~ 34792564 (+)
LOC110501070 wnt7b coding downstream 328962 34917692 ~ 34931171 (+)
LOC110500295 LOC106609100 coding downstream 440529 35029259 ~ 35033416 (+)
LOC110500296 LOC106609097 coding downstream 482640 35071370 ~ 35267800 (+)
G1730999 NA non-coding upstream 5048 34583207 ~ 34583466 (+)
G1730994 NA non-coding upstream 8484 34575248 ~ 34580030 (+)
G1730956 NA non-coding upstream 29654 34505242 ~ 34558860 (+)
G1730866 NA non-coding upstream 206067 34382193 ~ 34382447 (+)
G1730861 NA non-coding upstream 208666 34379588 ~ 34379848 (+)
G1731007 NA non-coding downstream 4180 34592910 ~ 34593116 (+)
G1731010 NA non-coding downstream 10973 34599703 ~ 34599903 (+)
G1731015 NA non-coding downstream 15151 34603881 ~ 34604819 (+)
G1731016 NA non-coding downstream 18234 34606964 ~ 34608157 (+)
G1731044 NA non-coding downstream 65688 34654418 ~ 34654668 (+)
G1729465 NA other upstream 1266753 33321453 ~ 33321761 (+)
LOC110500252 LOC106609149 other upstream 2426122 32153116 ~ 32162456 (+)
LOC110501063 LOC106609150 other upstream 2451818 32114413 ~ 32144886 (+)
G1727220 NA other upstream 3023920 31564135 ~ 31564594 (+)
G1732028 NA other downstream 850559 35439289 ~ 35484354 (+)
G1732735 NA other downstream 1452601 36041331 ~ 36042488 (+)
LOC110500325 ppp2r5b other downstream 1644392 36189389 ~ 36237829 (+)
G1733187 NA other downstream 2168259 36756989 ~ 36760221 (+)
zgc:109889 LOC100194703 other downstream 2659897 37248296 ~ 37314293 (+)

Expression


Co-expression Network