Gene
RNA
| Item | Value |
|---|---|
| gene id | G1731015 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 34603881 ~ 34604819 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1982580 | True | 939 | lncRNA | 0.39 | 1 | 34603881 | 34604819 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100135927 | LOC106609106 | coding | upstream | 274303 | 34325210 ~ 34329578 (+) |
| LOC110500288 | LOC106609107 | coding | upstream | 286084 | 34309099 ~ 34317797 (+) |
| LOC110500285 | fam19a5 | coding | upstream | 734865 | 33709461 ~ 33869016 (+) |
| LOC110500284 | LOC106609109 | coding | upstream | 1087893 | 33329927 ~ 33515988 (+) |
| LOC110500282 | LOC106609111 | coding | upstream | 1350358 | 33180674 ~ 33253523 (+) |
| LOC110500293 | LOC106609102 | coding | downstream | 161901 | 34766720 ~ 34782583 (+) |
| LOC118942784 | NA | coding | downstream | 179594 | 34784413 ~ 34792564 (+) |
| LOC110501070 | wnt7b | coding | downstream | 312873 | 34917692 ~ 34931171 (+) |
| LOC110500295 | LOC106609100 | coding | downstream | 424440 | 35029259 ~ 35033416 (+) |
| LOC110500296 | LOC106609097 | coding | downstream | 466551 | 35071370 ~ 35267800 (+) |
| G1731010 | NA | non-coding | upstream | 3978 | 34599703 ~ 34599903 (+) |
| G1731007 | NA | non-coding | upstream | 10765 | 34592910 ~ 34593116 (+) |
| G1731003 | NA | non-coding | upstream | 15151 | 34588514 ~ 34588730 (+) |
| G1730999 | NA | non-coding | upstream | 20415 | 34583207 ~ 34583466 (+) |
| G1730994 | NA | non-coding | upstream | 23851 | 34575248 ~ 34580030 (+) |
| G1731016 | NA | non-coding | downstream | 2145 | 34606964 ~ 34608157 (+) |
| G1731044 | NA | non-coding | downstream | 49599 | 34654418 ~ 34654668 (+) |
| G1731045 | NA | non-coding | downstream | 51036 | 34655855 ~ 34656197 (+) |
| G1731245 | NA | non-coding | downstream | 151485 | 34756304 ~ 34756566 (+) |
| G1731250 | NA | non-coding | downstream | 157317 | 34762136 ~ 34762399 (+) |
| G1729465 | NA | other | upstream | 1282120 | 33321453 ~ 33321761 (+) |
| LOC110500252 | LOC106609149 | other | upstream | 2441489 | 32153116 ~ 32162456 (+) |
| LOC110501063 | LOC106609150 | other | upstream | 2467185 | 32114413 ~ 32144886 (+) |
| G1727220 | NA | other | upstream | 3039287 | 31564135 ~ 31564594 (+) |
| G1732028 | NA | other | downstream | 834470 | 35439289 ~ 35484354 (+) |
| G1732735 | NA | other | downstream | 1436512 | 36041331 ~ 36042488 (+) |
| LOC110500325 | ppp2r5b | other | downstream | 1628303 | 36189389 ~ 36237829 (+) |
| G1733187 | NA | other | downstream | 2152170 | 36756989 ~ 36760221 (+) |
| zgc:109889 | LOC100194703 | other | downstream | 2643808 | 37248296 ~ 37314293 (+) |
