G1731045


Basic Information

Item Value
gene id G1731045
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 34655855 ~ 34656197 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1982614
atctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaattttccagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1982614 True 343 lncRNA 0.39 1 34655855 34656197

Neighbor

gene id symbol gene type direction distance location
LOC100135927 LOC106609106 coding upstream 326277 34325210 ~ 34329578 (+)
LOC110500288 LOC106609107 coding upstream 338058 34309099 ~ 34317797 (+)
LOC110500285 fam19a5 coding upstream 786839 33709461 ~ 33869016 (+)
LOC110500284 LOC106609109 coding upstream 1139867 33329927 ~ 33515988 (+)
LOC110500282 LOC106609111 coding upstream 1402332 33180674 ~ 33253523 (+)
LOC110500293 LOC106609102 coding downstream 110523 34766720 ~ 34782583 (+)
LOC118942784 NA coding downstream 128216 34784413 ~ 34792564 (+)
LOC110501070 wnt7b coding downstream 261495 34917692 ~ 34931171 (+)
LOC110500295 LOC106609100 coding downstream 373062 35029259 ~ 35033416 (+)
LOC110500296 LOC106609097 coding downstream 415173 35071370 ~ 35267800 (+)
G1731044 NA non-coding upstream 1187 34654418 ~ 34654668 (+)
G1731016 NA non-coding upstream 47698 34606964 ~ 34608157 (+)
G1731015 NA non-coding upstream 51036 34603881 ~ 34604819 (+)
G1731010 NA non-coding upstream 55952 34599703 ~ 34599903 (+)
G1731007 NA non-coding upstream 62739 34592910 ~ 34593116 (+)
G1731245 NA non-coding downstream 100107 34756304 ~ 34756566 (+)
G1731250 NA non-coding downstream 105939 34762136 ~ 34762399 (+)
G1731259 NA non-coding downstream 118095 34774292 ~ 34774617 (+)
G1731353 NA non-coding downstream 143379 34799576 ~ 34799946 (+)
G1731373 NA non-coding downstream 163797 34819994 ~ 34820259 (+)
G1729465 NA other upstream 1334094 33321453 ~ 33321761 (+)
LOC110500252 LOC106609149 other upstream 2493463 32153116 ~ 32162456 (+)
LOC110501063 LOC106609150 other upstream 2519159 32114413 ~ 32144886 (+)
G1727220 NA other upstream 3091261 31564135 ~ 31564594 (+)
G1732028 NA other downstream 783092 35439289 ~ 35484354 (+)
G1732735 NA other downstream 1385134 36041331 ~ 36042488 (+)
LOC110500325 ppp2r5b other downstream 1576925 36189389 ~ 36237829 (+)
G1733187 NA other downstream 2100792 36756989 ~ 36760221 (+)
zgc:109889 LOC100194703 other downstream 2592430 37248296 ~ 37314293 (+)

Expression


Co-expression Network