G1731245


Basic Information

Item Value
gene id G1731245
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 34756304 ~ 34756566 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1982861
gagtcgtggtcagatttgccgaaaggagggcgggggagggccttgtatgcatcgcggaagtaaaagtagcagtggtcgagtgttttagcagcgcgagtactacagtcaatgtgttgatagaacttctgcagcctttttctcaaatttgctttgttaaaattcccagctacaataaatgcggcctcaggatatgtggtttccagtttgcataaagtccttTGAGGGCCGTCGGggtattggcttgagggggatatacacggctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1982861 True 263 lncRNA 0.49 1 34756304 34756566

Neighbor

gene id symbol gene type direction distance location
LOC100135927 LOC106609106 coding upstream 426726 34325210 ~ 34329578 (+)
LOC110500288 LOC106609107 coding upstream 438507 34309099 ~ 34317797 (+)
LOC110500285 fam19a5 coding upstream 887288 33709461 ~ 33869016 (+)
LOC110500284 LOC106609109 coding upstream 1240316 33329927 ~ 33515988 (+)
LOC110500282 LOC106609111 coding upstream 1502781 33180674 ~ 33253523 (+)
LOC110500293 LOC106609102 coding downstream 10154 34766720 ~ 34782583 (+)
LOC118942784 NA coding downstream 27847 34784413 ~ 34792564 (+)
LOC110501070 wnt7b coding downstream 161126 34917692 ~ 34931171 (+)
LOC110500295 LOC106609100 coding downstream 272693 35029259 ~ 35033416 (+)
LOC110500296 LOC106609097 coding downstream 314804 35071370 ~ 35267800 (+)
G1731045 NA non-coding upstream 100107 34655855 ~ 34656197 (+)
G1731044 NA non-coding upstream 101636 34654418 ~ 34654668 (+)
G1731016 NA non-coding upstream 148147 34606964 ~ 34608157 (+)
G1731015 NA non-coding upstream 151485 34603881 ~ 34604819 (+)
G1731010 NA non-coding upstream 156401 34599703 ~ 34599903 (+)
G1731250 NA non-coding downstream 5570 34762136 ~ 34762399 (+)
G1731259 NA non-coding downstream 17726 34774292 ~ 34774617 (+)
G1731353 NA non-coding downstream 43010 34799576 ~ 34799946 (+)
G1731373 NA non-coding downstream 63428 34819994 ~ 34820259 (+)
G1731545 NA non-coding downstream 209926 34966492 ~ 34966722 (+)
G1729465 NA other upstream 1434543 33321453 ~ 33321761 (+)
LOC110500252 LOC106609149 other upstream 2593912 32153116 ~ 32162456 (+)
LOC110501063 LOC106609150 other upstream 2619608 32114413 ~ 32144886 (+)
G1727220 NA other upstream 3191710 31564135 ~ 31564594 (+)
G1732028 NA other downstream 682723 35439289 ~ 35484354 (+)
G1732735 NA other downstream 1284765 36041331 ~ 36042488 (+)
LOC110500325 ppp2r5b other downstream 1476556 36189389 ~ 36237829 (+)
G1733187 NA other downstream 2000423 36756989 ~ 36760221 (+)
zgc:109889 LOC100194703 other downstream 2492061 37248296 ~ 37314293 (+)

Expression


Co-expression Network