Gene
RNA
| Item | Value |
|---|---|
| gene id | G1731328 |
| gene name | LOC106609102 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 34773466 ~ 34773878 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transcription intermediary factor 1-alpha-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1982952 | True | 413 | TUCP | 0.69 | 1 | 34773466 | 34773878 |
34,771,600
34,772,000
34,772,400
34,772,800
34,773,200
34,773,600
34,774,000
34,774,400
34,774,800
34,775,200
34,775,600
34,776,000
NC_048585.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500294 | NA | coding | downstream | 6807 | 34763072 ~ 34766659 (-) |
| LOC110500291 | kdm5a | coding | downstream | 35699 | 34661170 ~ 34737767 (-) |
| LOC110501069 | LOC100306760 | coding | downstream | 126554 | 34605362 ~ 34646912 (-) |
| LOC110500290 | LOC106609105 | coding | downstream | 396925 | 34372230 ~ 34376541 (-) |
| LOC110500289 | LOC106609155 | coding | downstream | 448422 | 34318272 ~ 34325044 (-) |
| LOC118942799 | LOC106575957 | coding | upstream | 202332 | 34976210 ~ 34985602 (-) |
| LOC118942921 | NA | coding | upstream | 372874 | 35146752 ~ 35155262 (-) |
| LOC110500318 | LOC106609077 | coding | upstream | 667352 | 35441230 ~ 35484862 (-) |
| LOC118942785 | NA | coding | upstream | 824631 | 35598509 ~ 35600826 (-) |
| LOC118942922 | ostc | coding | upstream | 910960 | 35684838 ~ 35692822 (-) |
| G1731323 | NA | non-coding | downstream | 11535 | 34761652 ~ 34761931 (-) |
| G1731316 | NA | non-coding | downstream | 18291 | 34754960 ~ 34755175 (-) |
| G1731173 | NA | non-coding | downstream | 118360 | 34654865 ~ 34655106 (-) |
| G1731136 | NA | non-coding | downstream | 168575 | 34604298 ~ 34604891 (-) |
| G1731134 | NA | non-coding | downstream | 170060 | 34602071 ~ 34603406 (-) |
| G1731331 | NA | non-coding | upstream | 3846 | 34777724 ~ 34777946 (-) |
| G1731332 | LOC106609102 | non-coding | upstream | 4230 | 34778108 ~ 34778464 (-) |
| G1731335 | NA | non-coding | upstream | 11161 | 34785039 ~ 34785239 (-) |
| G1731336 | NA | non-coding | upstream | 11737 | 34785615 ~ 34785837 (-) |
| G1731363 | NA | non-coding | upstream | 30530 | 34804408 ~ 34804615 (-) |
| G1731156 | NA | other | downstream | 208291 | 34555871 ~ 34565175 (-) |
| G1730761 | NA | other | downstream | 443890 | 34325225 ~ 34329576 (-) |
| LOC110501068 | LOC106575995 | other | downstream | 500114 | 34269811 ~ 34288000 (-) |
| LOC110500269 | LOC106609159 | other | downstream | 2168836 | 32603262 ~ 32604698 (-) |
| G1731917 | NA | other | upstream | 439839 | 35213717 ~ 35245060 (-) |
| G1731967 | NA | other | upstream | 517355 | 35291233 ~ 35291754 (-) |
| G1731966 | NA | other | upstream | 518598 | 35292476 ~ 35295430 (-) |
| LOC110500321 | rpl34 | other | upstream | 945115 | 35718993 ~ 35735656 (-) |
| G1734384 | NA | other | upstream | 2560653 | 37334531 ~ 37334874 (-) |
