G1731353


Basic Information

Item Value
gene id G1731353
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 34799576 ~ 34799946 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1982979
aggagatccctcaggagacgatccgccacctcatcaggagcatgcccaggcgttgtagggaggtcatacaggcacgtggaggccacacacactacggagcctcattttgacttgttttaaggacattacatcaaagttggatcagcctgtggtgtggttttccactttaattttgagtgtgactccaaatccagacctccatgggttgataaatttgatttccattgatcatttttgtgtgattttgttgtcagcacattcaactatgtaaagaaaaaagtatttaataagaatatttcatttattcagatctaggatgtgttattttagtcttccctttatttttttgagcagtgtataatgtcTCAAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1982979 True 371 lncRNA 0.40 1 34799576 34799946

Neighbor

gene id symbol gene type direction distance location
LOC118942784 NA coding upstream 7012 34784413 ~ 34792564 (+)
LOC110500293 LOC106609102 coding upstream 16993 34766720 ~ 34782583 (+)
LOC100135927 LOC106609106 coding upstream 469998 34325210 ~ 34329578 (+)
LOC110500288 LOC106609107 coding upstream 481779 34309099 ~ 34317797 (+)
LOC110500285 fam19a5 coding upstream 930560 33709461 ~ 33869016 (+)
LOC110501070 wnt7b coding downstream 117746 34917692 ~ 34931171 (+)
LOC110500295 LOC106609100 coding downstream 229313 35029259 ~ 35033416 (+)
LOC110500296 LOC106609097 coding downstream 271424 35071370 ~ 35267800 (+)
sh2d1ab sh21a coding downstream 703745 35503671 ~ 35510121 (+)
LOC118942786 NA coding downstream 836641 35636587 ~ 35637138 (+)
G1731259 NA non-coding upstream 24959 34774292 ~ 34774617 (+)
G1731250 NA non-coding upstream 37177 34762136 ~ 34762399 (+)
G1731245 NA non-coding upstream 43010 34756304 ~ 34756566 (+)
G1731045 NA non-coding upstream 143379 34655855 ~ 34656197 (+)
G1731044 NA non-coding upstream 144908 34654418 ~ 34654668 (+)
G1731373 NA non-coding downstream 20048 34819994 ~ 34820259 (+)
G1731545 NA non-coding downstream 166546 34966492 ~ 34966722 (+)
G1731601 NA non-coding downstream 183903 34983849 ~ 34984050 (+)
G1731605 NA non-coding downstream 188805 34988751 ~ 34989001 (+)
G1731599 NA non-coding downstream 471111 35271057 ~ 35271595 (+)
G1729465 NA other upstream 1477815 33321453 ~ 33321761 (+)
LOC110500252 LOC106609149 other upstream 2637184 32153116 ~ 32162456 (+)
LOC110501063 LOC106609150 other upstream 2662880 32114413 ~ 32144886 (+)
G1727220 NA other upstream 3234982 31564135 ~ 31564594 (+)
G1732028 NA other downstream 639343 35439289 ~ 35484354 (+)
G1732735 NA other downstream 1241385 36041331 ~ 36042488 (+)
LOC110500325 ppp2r5b other downstream 1433176 36189389 ~ 36237829 (+)
G1733187 NA other downstream 1957043 36756989 ~ 36760221 (+)
zgc:109889 LOC100194703 other downstream 2448681 37248296 ~ 37314293 (+)

Expression


Co-expression Network