G1731373


Basic Information

Item Value
gene id G1731373
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 34819994 ~ 34820259 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1982999
cctctgtcattgccaacaaagggtatataacaaagtattgagaaactgttgttattgaccaaatacttagtttccaccataatttgcaagtaaattcattaaaaatcctacaatgtgattttctggatttttttttcttctcattttgtctgtcataggtacaattcaactatgaGAAACTTACAAgaactctcatctttttaagtgggagaacttgcacaattggtggctgactaaatacttttttgccccactgtataagtacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1982999 True 266 lncRNA 0.33 1 34819994 34820259

Neighbor

gene id symbol gene type direction distance location
LOC118942784 NA coding upstream 27430 34784413 ~ 34792564 (+)
LOC110500293 LOC106609102 coding upstream 37411 34766720 ~ 34782583 (+)
LOC100135927 LOC106609106 coding upstream 490416 34325210 ~ 34329578 (+)
LOC110500288 LOC106609107 coding upstream 502197 34309099 ~ 34317797 (+)
LOC110500285 fam19a5 coding upstream 950978 33709461 ~ 33869016 (+)
LOC110501070 wnt7b coding downstream 97433 34917692 ~ 34931171 (+)
LOC110500295 LOC106609100 coding downstream 209000 35029259 ~ 35033416 (+)
LOC110500296 LOC106609097 coding downstream 251111 35071370 ~ 35267800 (+)
sh2d1ab sh21a coding downstream 683432 35503671 ~ 35510121 (+)
LOC118942786 NA coding downstream 816328 35636587 ~ 35637138 (+)
G1731353 NA non-coding upstream 20048 34799576 ~ 34799946 (+)
G1731259 NA non-coding upstream 45377 34774292 ~ 34774617 (+)
G1731250 NA non-coding upstream 57595 34762136 ~ 34762399 (+)
G1731245 NA non-coding upstream 63428 34756304 ~ 34756566 (+)
G1731045 NA non-coding upstream 163797 34655855 ~ 34656197 (+)
G1731545 NA non-coding downstream 146233 34966492 ~ 34966722 (+)
G1731601 NA non-coding downstream 163590 34983849 ~ 34984050 (+)
G1731605 NA non-coding downstream 168492 34988751 ~ 34989001 (+)
G1731599 NA non-coding downstream 450798 35271057 ~ 35271595 (+)
G1731754 NA non-coding downstream 452949 35273208 ~ 35273445 (+)
G1729465 NA other upstream 1498233 33321453 ~ 33321761 (+)
LOC110500252 LOC106609149 other upstream 2657602 32153116 ~ 32162456 (+)
LOC110501063 LOC106609150 other upstream 2683298 32114413 ~ 32144886 (+)
G1727220 NA other upstream 3255400 31564135 ~ 31564594 (+)
G1732028 NA other downstream 619030 35439289 ~ 35484354 (+)
G1732735 NA other downstream 1221072 36041331 ~ 36042488 (+)
LOC110500325 ppp2r5b other downstream 1412863 36189389 ~ 36237829 (+)
G1733187 NA other downstream 1936730 36756989 ~ 36760221 (+)
zgc:109889 LOC100194703 other downstream 2428368 37248296 ~ 37314293 (+)

Expression


Co-expression Network