G1731601


Basic Information

Item Value
gene id G1731601
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 34983849 ~ 34984050 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1983243
cagcatcagtgagattcaaacctataatattctattctctatccatggaattagtccactgcgccaccaggatggagctagcatgccatgtttttttaagcattcaaagctgttcattttagtctattcaaacagaccctaCTTCAAAGGAAACAAACACTCATTATTAGGTGTGGAAAACAGAATGCATATGTTTTTAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1983243 True 202 lncRNA 0.37 1 34983849 34984050

Neighbor

gene id symbol gene type direction distance location
LOC110501070 wnt7b coding upstream 52678 34917692 ~ 34931171 (+)
LOC118942784 NA coding upstream 191285 34784413 ~ 34792564 (+)
LOC110500293 LOC106609102 coding upstream 201266 34766720 ~ 34782583 (+)
LOC100135927 LOC106609106 coding upstream 654271 34325210 ~ 34329578 (+)
LOC110500288 LOC106609107 coding upstream 666052 34309099 ~ 34317797 (+)
LOC110500295 LOC106609100 coding downstream 45209 35029259 ~ 35033416 (+)
LOC110500296 LOC106609097 coding downstream 87320 35071370 ~ 35267800 (+)
sh2d1ab sh21a coding downstream 519641 35503671 ~ 35510121 (+)
LOC118942786 NA coding downstream 652537 35636587 ~ 35637138 (+)
LOC110500322 LOC106609072 coding downstream 804441 35788491 ~ 35982905 (+)
G1731545 NA non-coding upstream 17127 34966492 ~ 34966722 (+)
G1731373 NA non-coding upstream 163590 34819994 ~ 34820259 (+)
G1731353 NA non-coding upstream 183903 34799576 ~ 34799946 (+)
G1731259 NA non-coding upstream 209232 34774292 ~ 34774617 (+)
G1731250 NA non-coding upstream 221450 34762136 ~ 34762399 (+)
G1731605 NA non-coding downstream 4701 34988751 ~ 34989001 (+)
G1731599 NA non-coding downstream 287007 35271057 ~ 35271595 (+)
G1731754 NA non-coding downstream 289158 35273208 ~ 35273445 (+)
G1731755 NA non-coding downstream 289575 35273625 ~ 35273884 (+)
G1731757 NA non-coding downstream 293788 35277838 ~ 35278261 (+)
LOC110500285 fam19a5 other upstream 1114872 33709461 ~ 33869016 (+)
G1729465 NA other upstream 1662088 33321453 ~ 33321761 (+)
LOC110500252 LOC106609149 other upstream 2821457 32153116 ~ 32162456 (+)
LOC110501063 LOC106609150 other upstream 2847153 32114413 ~ 32144886 (+)
G1727220 NA other upstream 3419255 31564135 ~ 31564594 (+)
G1732028 NA other downstream 455239 35439289 ~ 35484354 (+)
G1732735 NA other downstream 1057281 36041331 ~ 36042488 (+)
LOC110500325 ppp2r5b other downstream 1249072 36189389 ~ 36237829 (+)
G1733187 NA other downstream 1772939 36756989 ~ 36760221 (+)
zgc:109889 LOC100194703 other downstream 2264577 37248296 ~ 37314293 (+)

Expression


Co-expression Network