Item | Value |
---|---|
gene id | G1731975 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048585.1 |
NCBI id | CM023239.2 |
chromosome length | 64935962 |
location | 35301084 ~ 35301603 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1983666 | True | 520 | lncRNA | 0.39 | 1 | 35301084 | 35301603 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110500296 | LOC106609097 | coding | upstream | 33284 | 35071370 ~ 35267800 (+) |
LOC110500295 | LOC106609100 | coding | upstream | 267668 | 35029259 ~ 35033416 (+) |
LOC110501070 | wnt7b | coding | upstream | 369913 | 34917692 ~ 34931171 (+) |
LOC118942784 | NA | coding | upstream | 508520 | 34784413 ~ 34792564 (+) |
LOC110500293 | LOC106609102 | coding | upstream | 518501 | 34766720 ~ 34782583 (+) |
sh2d1ab | sh21a | coding | downstream | 202088 | 35503671 ~ 35510121 (+) |
LOC118942786 | NA | coding | downstream | 334984 | 35636587 ~ 35637138 (+) |
LOC110500322 | LOC106609072 | coding | downstream | 486888 | 35788491 ~ 35982905 (+) |
sepsecs | sepsecs | coding | downstream | 698218 | 35999821 ~ 36039069 (+) |
lgi2a | LOC106609075 | coding | downstream | 756513 | 36058116 ~ 36094464 (+) |
G1731749 | NA | non-coding | upstream | 5164 | 35295534 ~ 35295920 (+) |
G1731748 | NA | non-coding | upstream | 11549 | 35288851 ~ 35289535 (+) |
G1731757 | NA | non-coding | upstream | 22823 | 35277838 ~ 35278261 (+) |
G1731755 | NA | non-coding | upstream | 27200 | 35273625 ~ 35273884 (+) |
G1731754 | NA | non-coding | upstream | 27639 | 35273208 ~ 35273445 (+) |
G1731980 | NA | non-coding | downstream | 5979 | 35307582 ~ 35308505 (+) |
G1732029 | NA | non-coding | downstream | 89991 | 35391594 ~ 35391883 (+) |
G1732030 | NA | non-coding | downstream | 92318 | 35393921 ~ 35394210 (+) |
G1732034 | NA | non-coding | downstream | 101343 | 35402946 ~ 35403714 (+) |
G1732038 | NA | non-coding | downstream | 123608 | 35425211 ~ 35425999 (+) |
LOC110500285 | fam19a5 | other | upstream | 1432107 | 33709461 ~ 33869016 (+) |
G1729465 | NA | other | upstream | 1979323 | 33321453 ~ 33321761 (+) |
LOC110500252 | LOC106609149 | other | upstream | 3138692 | 32153116 ~ 32162456 (+) |
LOC110501063 | LOC106609150 | other | upstream | 3164388 | 32114413 ~ 32144886 (+) |
G1727220 | NA | other | upstream | 3736490 | 31564135 ~ 31564594 (+) |
G1732028 | NA | other | downstream | 137686 | 35439289 ~ 35484354 (+) |
G1732735 | NA | other | downstream | 739728 | 36041331 ~ 36042488 (+) |
LOC110500325 | ppp2r5b | other | downstream | 931519 | 36189389 ~ 36237829 (+) |
G1733187 | NA | other | downstream | 1455386 | 36756989 ~ 36760221 (+) |
zgc:109889 | LOC100194703 | other | downstream | 1947024 | 37248296 ~ 37314293 (+) |