Gene
RNA
| Item | Value |
|---|---|
| gene id | G1732030 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 35393921 ~ 35394210 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1983726 | True | 290 | lncRNA | 0.37 | 1 | 35393921 | 35394210 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500296 | LOC106609097 | coding | upstream | 126121 | 35071370 ~ 35267800 (+) |
| LOC110500295 | LOC106609100 | coding | upstream | 360505 | 35029259 ~ 35033416 (+) |
| LOC110501070 | wnt7b | coding | upstream | 462750 | 34917692 ~ 34931171 (+) |
| LOC118942784 | NA | coding | upstream | 601357 | 34784413 ~ 34792564 (+) |
| LOC110500293 | LOC106609102 | coding | upstream | 611338 | 34766720 ~ 34782583 (+) |
| sh2d1ab | sh21a | coding | downstream | 109481 | 35503671 ~ 35510121 (+) |
| LOC118942786 | NA | coding | downstream | 242377 | 35636587 ~ 35637138 (+) |
| LOC110500322 | LOC106609072 | coding | downstream | 394281 | 35788491 ~ 35982905 (+) |
| sepsecs | sepsecs | coding | downstream | 605611 | 35999821 ~ 36039069 (+) |
| lgi2a | LOC106609075 | coding | downstream | 663906 | 36058116 ~ 36094464 (+) |
| G1732029 | NA | non-coding | upstream | 2038 | 35391594 ~ 35391883 (+) |
| G1731980 | NA | non-coding | upstream | 85416 | 35307582 ~ 35308505 (+) |
| G1731975 | NA | non-coding | upstream | 92318 | 35301084 ~ 35301603 (+) |
| G1731749 | NA | non-coding | upstream | 98001 | 35295534 ~ 35295920 (+) |
| G1731748 | NA | non-coding | upstream | 104386 | 35288851 ~ 35289535 (+) |
| G1732034 | NA | non-coding | downstream | 8736 | 35402946 ~ 35403714 (+) |
| G1732038 | NA | non-coding | downstream | 31001 | 35425211 ~ 35425999 (+) |
| G1732024 | NA | non-coding | downstream | 46514 | 35440724 ~ 35442473 (+) |
| G1732071 | NA | non-coding | downstream | 130256 | 35524466 ~ 35524815 (+) |
| LOC110500285 | fam19a5 | other | upstream | 1524944 | 33709461 ~ 33869016 (+) |
| G1729465 | NA | other | upstream | 2072160 | 33321453 ~ 33321761 (+) |
| LOC110500252 | LOC106609149 | other | upstream | 3231529 | 32153116 ~ 32162456 (+) |
| LOC110501063 | LOC106609150 | other | upstream | 3257225 | 32114413 ~ 32144886 (+) |
| G1727220 | NA | other | upstream | 3829327 | 31564135 ~ 31564594 (+) |
| G1732028 | NA | other | downstream | 45079 | 35439289 ~ 35484354 (+) |
| G1732735 | NA | other | downstream | 647121 | 36041331 ~ 36042488 (+) |
| LOC110500325 | ppp2r5b | other | downstream | 838912 | 36189389 ~ 36237829 (+) |
| G1733187 | NA | other | downstream | 1362779 | 36756989 ~ 36760221 (+) |
| zgc:109889 | LOC100194703 | other | downstream | 1854417 | 37248296 ~ 37314293 (+) |
