G1732028


Basic Information

Item Value
gene id G1732028
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 35439289 ~ 35484354 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1983724
taagtatttggtcaataacaaaagtttatctcaatactttgttatataccctttgttggcaatgacagaggtcaaatgttttctgtaagtcttcacaaggtttccacacactgttgctggtattttggctcattcctccatgcagatctcatctagagcagtaatgttttggggctgttgctgggcaacacggactttcaactccctccaaagattgtctatggggttgagatctggagactggctaggccactccaggaccttaaaatgcttcttacgaagccactccttcgttgcccgggcggtgtgtttgggatcattgtcatgctgaaagacccagccacatttcatcttcaatgcccttgctgatggaaagaggttttcactcaaaatctcacgatacatggccccattcattctttcctttacacggatcagtcgtcctggaccctttgcagaaaaacagccccaaagcatgatgtttccacccccatgcttcacagtaggtatggggttatttGAATGCAACTCAGCGTTCTTTGTCCTCCAACCACGAcgggttgagtttttaccaaaaagttatattttggtttcatctgaccatatgacattctcccatatgaccattctcccaatcttcttctggatcatccaaatgctctctagcaaactttagatgggcctggacatgtactggcttaaacaggggaacatgtctggcactgcaggatttgtgtTCTTGGcgtcgtagtgtgttactgatggtagtctttgttactttggtcccagctctctgcaggtaattcactaggtccccccgtgtggttctgggatttttgctcaccgttcttgtgatcattttgaccccacggggtgagatcttgcgtggagccccagatcgagggagattatcagtggtcttgtatgtcttccatttcctaatacttgctccaacagttgatttcttcaaaccaagcttgcttacctattgcagattcagtcttcccagcctggtgcaggtctatcATTTTATTTCTGGtgtcttttgacagctctttggtcttggccatagtggagtttggagtgtgactgtttgaggttgtggacagttgtcttttatactgataacaagttcaaacaggtgccattaatacaggtaacgagtaaagaagaagttacaggtctgtgagagccagaaatattgcctgtttgtaggtgaccaaatacttattttccaccataatttgcaaataaattaatttaaaatcctacaacGTGATTCTCTCCTCGGGATTCCACCCACAGTAGAATGGGTAAACGGAGCGGGCCAACCAGGAGCTGGAAAAGTTCCTCCGCTGTTTCGTCTCCAGCCAGGCCAGCAACTGGAGAAAGTTCCTCGTCTGGGTGGAGTATGCTCACAACACACTGCGGAACTCATCCACTGGACTGTCACCATTCAAATGAGAGTTTGGGTTTGGACCCCCCCCGTTTCCATAACAAGAGGCTGAAACTGGGGTGCCATCAGCCAAGGCGTTCATTTGACGAGGTCGCAACACCTGGATCAGTGCGCAATCCTCCTTGCTCCGCTCCTCTGCCCGACACCAACACCAGGAAAACCAGCACCGAAGGCCTCATCGGCTCCTCCGACCGGGTCAATGGGTGTGGCTGTCCACCCATGATATTCCCTTAAAGGTGGACTTGCAGAAGCTCGCACCACGCTACATAGGATCATTCAAGATCCTGAGTCACATCAACCCGGTCCACTATTGTCTCAAGCTTCCCAGGTCTATGAGGGTCTGTCCATCCTTCCATGTCTCCCGTCTCAAGTTAGTATTGACCAGCCTACACTGTCCATCGTCTGTTGGATGCACGTTGGGTCTGAGGTACCCTGCGATGAATGTGGACTGTGAGGGCAAGGCACAGAGGAGCGGGCGTGGGAGGCTGCCCAGAATCTCCTGGATCCAGGACTCTTTTGGGACTTCAACCAACTGCTTGGTGGTCGCCCTGGCTCCGCGGCTGGGTCCGCTCCTAGAAGGGGTactgtcatggttccacctgtgaccagagggcggcagaggccgtcctagagacattaacgGCACTCAGGTGTGTCCAATTTACTCAAGATTTTTTGGTTAAAAGAagtgtgttttctgttgtcctttgcagaagcttgaataGTTTACCTTGTGCGTTTGTTTCCTGCGTGAGTTTGAGACTTAGTGATTTATTGTGTGACGTATTGTCTTATGGTACATTTAGTTGGAACGCCTATCCAGTTGTGGTATCTGGTTAACatgttgtgtggtattgtgttgtgttaaatTGTGTTGTGTAGCGGTACCTTTTGTTGGAAATCCTATCCAGTTGAAGTATCTGGTTAATTTTGTGTATGTGGTACCTTTAGTGGGAACTCCTATCCAGTTGAGGTATCTGGTCAACTTTTTGGAGATGTAGGTCTTCCCTCTAGCAGGCAGCCCCACCATCACAATCATGGTAGGAGAGTTAGTGAACTGAGGGACGGAcgctgaaaaacacacacacacagatggattaAAAACTGAcatggcacacacatacacatgtattGGAGTAATACAAAGatcaaagaacacacacacacatcagtttTAGACAAATGGATAGACCAcgtaacacacacgcacagac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1983724 True 2670 TUCP 0.47 2 35439289 35484354

Neighbor

gene id symbol gene type direction distance location
LOC110500296 LOC106609097 coding upstream 171489 35071370 ~ 35267800 (+)
LOC110500295 LOC106609100 coding upstream 405873 35029259 ~ 35033416 (+)
LOC110501070 wnt7b coding upstream 508118 34917692 ~ 34931171 (+)
LOC118942784 NA coding upstream 646725 34784413 ~ 34792564 (+)
LOC110500293 LOC106609102 coding upstream 656706 34766720 ~ 34782583 (+)
sh2d1ab sh21a coding downstream 19337 35503671 ~ 35510121 (+)
LOC118942786 NA coding downstream 152233 35636587 ~ 35637138 (+)
LOC110500322 LOC106609072 coding downstream 304137 35788491 ~ 35982905 (+)
sepsecs sepsecs coding downstream 515467 35999821 ~ 36039069 (+)
lgi2a LOC106609075 coding downstream 573762 36058116 ~ 36094464 (+)
G1732038 NA non-coding upstream 13290 35425211 ~ 35425999 (+)
G1732034 NA non-coding upstream 35575 35402946 ~ 35403714 (+)
G1732030 NA non-coding upstream 45079 35393921 ~ 35394210 (+)
G1732029 NA non-coding upstream 47406 35391594 ~ 35391883 (+)
G1731980 NA non-coding upstream 130784 35307582 ~ 35308505 (+)
G1732071 NA non-coding downstream 40112 35524466 ~ 35524815 (+)
G1732129 NA non-coding downstream 51506 35535860 ~ 35536095 (+)
G1732137 NA non-coding downstream 56572 35540926 ~ 35541184 (+)
G1732141 NA non-coding downstream 58644 35542998 ~ 35543217 (+)
LOC110500285 fam19a5 other upstream 1570312 33709461 ~ 33869016 (+)
G1729465 NA other upstream 2117528 33321453 ~ 33321761 (+)
LOC110500252 LOC106609149 other upstream 3276897 32153116 ~ 32162456 (+)
LOC110501063 LOC106609150 other upstream 3302593 32114413 ~ 32144886 (+)
G1727220 NA other upstream 3874695 31564135 ~ 31564594 (+)
G1732735 NA other downstream 556977 36041331 ~ 36042488 (+)
LOC110500325 ppp2r5b other downstream 748768 36189389 ~ 36237829 (+)
G1733187 NA other downstream 1272635 36756989 ~ 36760221 (+)
zgc:109889 LOC100194703 other downstream 1764273 37248296 ~ 37314293 (+)
G1734420 NA other downstream 1886603 37370957 ~ 37371667 (+)

Expression


Co-expression Network