G1732024


Basic Information

Item Value
gene id G1732024
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 35440724 ~ 35442473 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1983719
tccgGACTCCAACTTTGCTCCTCCTAATATTTATAAATTCCAttattttagatttgtgtgtgttgttgtgaattgtttgatattactgcactgtttgagCTGGCAACACTACAcccaagcatttcactacacccacaataaaatctgctaaatatgtgtatgtgaccaacaaaatttgatttgatgtgaaaaTCCACATCATCACATGTGACACAATTTCACATATGCAATGTCACATGTGAGTTCATGTGTTTTTTCCGTAAGGGGAGTGCTGTCCACGATGCACCATTTTAAAGGCAATTTTGCACATCCCGCGGAAATCACATTGATGATAAACACTGCAGATTTCTAAATTAAAGGTAATCAGAAATTACCTTTATATGTCAAGCGCTCTACAACGCACCTCAGAATGAATCCCAGCCTCAATCAGTCACACCTTTTACATGGCACACCACTTGCAAACAACACACACGGACACGCATGGAAATATGGACCAGACCAGAGCGCAGAATTAAACCAGtgtatgatgatgatggttagacTAGATGATTCTAACACACATGCAGACTACACGATCCTAACACATAGACAGACTAGATTATCCTGATAGACTACATCAGCGTTTCCCAAATTTGATCCtcaGGACAACATGATCCtaacatatatttatttattttatttaactaggcaagtcagttaagaacaaattcttattttcaatgacggcctaggaacagtgggttaactgccgggggaacgacagatttgtaccttgtcagctcgggggtttgaacttgcaaccttccggttactagtccaatgctctaaccactaggctaccctgccggtaGACACaTGAtcctaacacacagacagacaaattaTTGAATTCACTTCATTCTACTGTCACTAACAGGGTTCCACTGTGAGAGATGTTGCATTGTTTTCTAGCACCGTTTAGACAGAGAATTATAGTGTAGGGTTCATGTAGTCTGGTCCTTTAAACTCCATTTCCCAGCAGTCTCTCTTATTGCTTCACTTAAGTGTCTACGGCAATGGTGTCTCTTCATTGGTTCTCCCTGTATTGTGTCGCAATATcgtagctctcctctcctcctccagatgTCGTCTGGGACCATCAGTCgaccctctctcatcctctcctctcctcctctatatgTGGTCTGGGACTGTCAGTAGTGCCTCCTCTGGTTCTCTGTCCACGTCAACATTCActggtttgtctctgtgtgtgt
>TU1983720
tccgGACTCCAACTTTGCTCCTCCTAATATTTATAAATTCCAttattttagatttgtgtgtgttgttgtgaattgtttgatattactgcactgtttgagCTGGCAACACTACAcccaagcatttcactacacccacaataaaatctgctaaatatgtgtatgtgaccaacaaaatttgatttgatgtgaaaaTCCACATCATCACATGTGACACAATTTCACATATGCAATGTCACATGTGAGTTCATGTGTTTTTTCCGTAAGGGGAGTGCTGTCCACGATGCACCATTTTAAAGGCAATTTTGCACATCCCGCGGAAATCACATTGATGATAAACACTGCAGATTTCTAAATTAAAGGTAATCAGAAATTACCTTTATATGTCAAGCGCTCTACAACGCACCTCAGAATGAATCCCAGCCTCAATCAGTCACACCTTTTACATGGCACACCACTTGCAAACAACACACACGGACACGCATGGAAATATGGACCAGACCAGAGCGCAGAATTAAACCAGtgtatgatgatgatggttagacTAGATGATTCTAACACACATGCAGACTACACGATCCTAACACATAGACAGACTAGATTATCCTGATAGACTACATCAGCGTTTCCCAAATTTGATCCtcAGGACCGAGTTTGTGAAATCCTGGACAACATGATCCtaacatatatttatttattttatttaactaggcaagtcagttaagaacaaattcttattttcaatgacggcctaggaacagtgggttaactgccgggggaacgacagatttgtaccttgtcagctcgggggtttgaacttgcaaccttccggttactagtccaatgctctaaccactaggctaccctgccggtaGACACaTGAtcctaacacacagacagacaaattaTTGAATTCACTTCATTCTACTGTCACTAACAGGGTTCCACTGTGAGAGATGTTGCATTGTTTTCTAGCACCGTTTAGACAGAGAATTATAGTGTAGGGTTCATGTAGTCTGGTCCTTTAAACTCCATTTCCCAGCAGTCTCTCTTATTGCTTCACTTAAGTGTCTACGGCAATGGTGTCTCTTCATTGGTTCTCCCTGTATTGTGTCGCAATATcgtagctctcctctcctcctccagatgTCGTCTGGGACCATCAGTCgaccctctctcatcctctcctctcctcctctatatgTGGTCTGGGACTGTCAGTAGTGCCTCCTCTGGTTCTCTGTCCACGTCAACATTCActggtttgtctctgtgtgtgt

Function

NR:

description
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1983719 False 1256 lncRNA 0.42 4 35440724 35442473
TU1983720 True 1277 lncRNA 0.42 4 35440724 35442473

Neighbor

gene id symbol gene type direction distance location
LOC110500296 LOC106609097 coding upstream 172924 35071370 ~ 35267800 (+)
LOC110500295 LOC106609100 coding upstream 407308 35029259 ~ 35033416 (+)
LOC110501070 wnt7b coding upstream 509553 34917692 ~ 34931171 (+)
LOC118942784 NA coding upstream 648160 34784413 ~ 34792564 (+)
LOC110500293 LOC106609102 coding upstream 658141 34766720 ~ 34782583 (+)
sh2d1ab sh21a coding downstream 61218 35503671 ~ 35510121 (+)
LOC118942786 NA coding downstream 194114 35636587 ~ 35637138 (+)
LOC110500322 LOC106609072 coding downstream 346018 35788491 ~ 35982905 (+)
sepsecs sepsecs coding downstream 557348 35999821 ~ 36039069 (+)
lgi2a LOC106609075 coding downstream 615643 36058116 ~ 36094464 (+)
G1732038 NA non-coding upstream 14725 35425211 ~ 35425999 (+)
G1732034 NA non-coding upstream 37010 35402946 ~ 35403714 (+)
G1732030 NA non-coding upstream 46514 35393921 ~ 35394210 (+)
G1732029 NA non-coding upstream 48841 35391594 ~ 35391883 (+)
G1731980 NA non-coding upstream 132219 35307582 ~ 35308505 (+)
G1732071 NA non-coding downstream 81993 35524466 ~ 35524815 (+)
G1732129 NA non-coding downstream 93387 35535860 ~ 35536095 (+)
G1732137 NA non-coding downstream 98453 35540926 ~ 35541184 (+)
G1732141 NA non-coding downstream 100525 35542998 ~ 35543217 (+)
LOC110500285 fam19a5 other upstream 1571747 33709461 ~ 33869016 (+)
G1729465 NA other upstream 2118963 33321453 ~ 33321761 (+)
LOC110500252 LOC106609149 other upstream 3278332 32153116 ~ 32162456 (+)
LOC110501063 LOC106609150 other upstream 3304028 32114413 ~ 32144886 (+)
G1727220 NA other upstream 3876130 31564135 ~ 31564594 (+)
G1732735 NA other downstream 598858 36041331 ~ 36042488 (+)
LOC110500325 ppp2r5b other downstream 790649 36189389 ~ 36237829 (+)
G1733187 NA other downstream 1314516 36756989 ~ 36760221 (+)
zgc:109889 LOC100194703 other downstream 1806154 37248296 ~ 37314293 (+)
G1734420 NA other downstream 1928484 37370957 ~ 37371667 (+)

Expression


Co-expression Network