G1732071


Basic Information

Item Value
gene id G1732071
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 35524466 ~ 35524815 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1983767
acagtggcctccatcattcttaaatggaataagtttggaaccaccaagacttaaCCAAGTGTAACGGTTGtcgtcttcctcttctgaggaggagtaggaaatatcggaccaatatgcagcgtggtaagtgttcgtcatattcATTTCACAGAACACAGAAAACAAACGAACAAGCGAATaaaggaaaaccgaaacagtcccgtatggggaaaacactgaaacggaaaataaccacccacaaacaagagtgggaaaacaggctacctaactatggttctcattcagagacaacgattgacagctgcctctgattgggaaccatatgtACACTCCATGAAATTATTTGGTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1983767 True 350 lncRNA 0.42 1 35524466 35524815

Neighbor

gene id symbol gene type direction distance location
sh2d1ab sh21a coding upstream 14345 35503671 ~ 35510121 (+)
LOC110500296 LOC106609097 coding upstream 256666 35071370 ~ 35267800 (+)
LOC110500295 LOC106609100 coding upstream 491050 35029259 ~ 35033416 (+)
LOC110501070 wnt7b coding upstream 593295 34917692 ~ 34931171 (+)
LOC118942784 NA coding upstream 731902 34784413 ~ 34792564 (+)
LOC118942786 NA coding downstream 111772 35636587 ~ 35637138 (+)
LOC110500322 LOC106609072 coding downstream 263676 35788491 ~ 35982905 (+)
sepsecs sepsecs coding downstream 475006 35999821 ~ 36039069 (+)
lgi2a LOC106609075 coding downstream 533301 36058116 ~ 36094464 (+)
LOC118942923 NA coding downstream 595701 36120516 ~ 36123923 (+)
G1732024 NA non-coding upstream 81993 35440724 ~ 35442473 (+)
G1732038 NA non-coding upstream 98467 35425211 ~ 35425999 (+)
G1732034 NA non-coding upstream 120752 35402946 ~ 35403714 (+)
G1732030 NA non-coding upstream 130256 35393921 ~ 35394210 (+)
G1732129 NA non-coding downstream 11045 35535860 ~ 35536095 (+)
G1732137 NA non-coding downstream 16111 35540926 ~ 35541184 (+)
G1732141 NA non-coding downstream 18183 35542998 ~ 35543217 (+)
G1732143 NA non-coding downstream 19198 35544013 ~ 35544259 (+)
G1732168 NA non-coding downstream 32664 35557479 ~ 35557711 (+)
G1732028 NA other upstream 40112 35439289 ~ 35484354 (+)
LOC110500285 fam19a5 other upstream 1655489 33709461 ~ 33869016 (+)
G1729465 NA other upstream 2202705 33321453 ~ 33321761 (+)
LOC110500252 LOC106609149 other upstream 3362074 32153116 ~ 32162456 (+)
LOC110501063 LOC106609150 other upstream 3387770 32114413 ~ 32144886 (+)
G1732735 NA other downstream 516516 36041331 ~ 36042488 (+)
LOC110500325 ppp2r5b other downstream 708307 36189389 ~ 36237829 (+)
G1733187 NA other downstream 1232174 36756989 ~ 36760221 (+)
zgc:109889 LOC100194703 other downstream 1723812 37248296 ~ 37314293 (+)
G1734420 NA other downstream 1846142 37370957 ~ 37371667 (+)

Expression


Co-expression Network