G1732168


Basic Information

Item Value
gene id G1732168
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 35557479 ~ 35557711 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1983868
acataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggttatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcaccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1983868 True 233 lncRNA 0.35 1 35557479 35557711

Neighbor

gene id symbol gene type direction distance location
sh2d1ab sh21a coding upstream 47358 35503671 ~ 35510121 (+)
LOC110500296 LOC106609097 coding upstream 289679 35071370 ~ 35267800 (+)
LOC110500295 LOC106609100 coding upstream 524063 35029259 ~ 35033416 (+)
LOC110501070 wnt7b coding upstream 626308 34917692 ~ 34931171 (+)
LOC118942784 NA coding upstream 764915 34784413 ~ 34792564 (+)
LOC118942786 NA coding downstream 78876 35636587 ~ 35637138 (+)
LOC110500322 LOC106609072 coding downstream 230780 35788491 ~ 35982905 (+)
sepsecs sepsecs coding downstream 442110 35999821 ~ 36039069 (+)
lgi2a LOC106609075 coding downstream 500405 36058116 ~ 36094464 (+)
LOC118942923 NA coding downstream 562805 36120516 ~ 36123923 (+)
G1732143 NA non-coding upstream 13220 35544013 ~ 35544259 (+)
G1732141 NA non-coding upstream 14262 35542998 ~ 35543217 (+)
G1732137 NA non-coding upstream 16295 35540926 ~ 35541184 (+)
G1732129 NA non-coding upstream 21384 35535860 ~ 35536095 (+)
G1732071 NA non-coding upstream 32664 35524466 ~ 35524815 (+)
G1732201 NA non-coding downstream 21338 35579049 ~ 35579489 (+)
G1732205 NA non-coding downstream 24740 35582451 ~ 35582665 (+)
G1732207 NA non-coding downstream 26263 35583974 ~ 35584200 (+)
G1732241 NA non-coding downstream 47110 35604821 ~ 35605040 (+)
G1732246 NA non-coding downstream 55376 35613087 ~ 35613425 (+)
G1732028 NA other upstream 73125 35439289 ~ 35484354 (+)
LOC110500285 fam19a5 other upstream 1688502 33709461 ~ 33869016 (+)
G1729465 NA other upstream 2235718 33321453 ~ 33321761 (+)
LOC110500252 LOC106609149 other upstream 3395087 32153116 ~ 32162456 (+)
LOC110501063 LOC106609150 other upstream 3420783 32114413 ~ 32144886 (+)
G1732735 NA other downstream 483620 36041331 ~ 36042488 (+)
LOC110500325 ppp2r5b other downstream 675411 36189389 ~ 36237829 (+)
G1733187 NA other downstream 1199278 36756989 ~ 36760221 (+)
zgc:109889 LOC100194703 other downstream 1690916 37248296 ~ 37314293 (+)
G1734420 NA other downstream 1813246 37370957 ~ 37371667 (+)

Expression


Co-expression Network