G1732248


Basic Information

Item Value
gene id G1732248
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 35614403 ~ 35614607 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1983955
ttttgtagtgtttgcattgattcgtgttttacgtttgttcattaaaacatggatcgcaatctacacgctgcattttggtccgactctccttctcataaagaaaaccgttacagaatcacccaccaccaacggaccaagcggcgtgtcaacaggcagcagcagcagcaaaaagaggagttacgttgtaaggatttctggacatggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1983955 True 205 lncRNA 0.45 1 35614403 35614607

Neighbor

gene id symbol gene type direction distance location
sh2d1ab sh21a coding upstream 104282 35503671 ~ 35510121 (+)
LOC110500296 LOC106609097 coding upstream 346603 35071370 ~ 35267800 (+)
LOC110500295 LOC106609100 coding upstream 580987 35029259 ~ 35033416 (+)
LOC110501070 wnt7b coding upstream 683232 34917692 ~ 34931171 (+)
LOC118942784 NA coding upstream 821839 34784413 ~ 34792564 (+)
LOC118942786 NA coding downstream 21980 35636587 ~ 35637138 (+)
LOC110500322 LOC106609072 coding downstream 173884 35788491 ~ 35982905 (+)
sepsecs sepsecs coding downstream 385214 35999821 ~ 36039069 (+)
lgi2a LOC106609075 coding downstream 443509 36058116 ~ 36094464 (+)
LOC118942923 NA coding downstream 505909 36120516 ~ 36123923 (+)
G1732246 NA non-coding upstream 978 35613087 ~ 35613425 (+)
G1732241 NA non-coding upstream 9363 35604821 ~ 35605040 (+)
G1732207 NA non-coding upstream 30203 35583974 ~ 35584200 (+)
G1732205 NA non-coding upstream 31738 35582451 ~ 35582665 (+)
G1732201 NA non-coding upstream 34914 35579049 ~ 35579489 (+)
G1732250 NA non-coding downstream 6613 35621220 ~ 35621451 (+)
G1732307 NA non-coding downstream 47985 35662592 ~ 35662851 (+)
G1732308 NA non-coding downstream 48947 35663554 ~ 35663953 (+)
G1732309 NA non-coding downstream 50788 35665395 ~ 35665595 (+)
G1732317 NA non-coding downstream 56190 35670797 ~ 35672386 (+)
G1732028 NA other upstream 130049 35439289 ~ 35484354 (+)
LOC110500285 fam19a5 other upstream 1745426 33709461 ~ 33869016 (+)
G1729465 NA other upstream 2292642 33321453 ~ 33321761 (+)
LOC110500252 LOC106609149 other upstream 3452011 32153116 ~ 32162456 (+)
LOC110501063 LOC106609150 other upstream 3477707 32114413 ~ 32144886 (+)
G1732735 NA other downstream 426724 36041331 ~ 36042488 (+)
LOC110500325 ppp2r5b other downstream 618515 36189389 ~ 36237829 (+)
G1733187 NA other downstream 1142382 36756989 ~ 36760221 (+)
zgc:109889 LOC100194703 other downstream 1634020 37248296 ~ 37314293 (+)
G1734420 NA other downstream 1756350 37370957 ~ 37371667 (+)

Expression


Co-expression Network