G1732334


Basic Information

Item Value
gene id G1732334
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 35682873 ~ 35683096 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1984057
ACTTACTCTGCTTGTCCCAGTTTATACCCTCATTTGCAATGCAAACCATAACTTACAATGGGAATAAATGAAAGTTACTAATTTTTAAATGGGGTAGAAActgaatttgtatttattagggatcccaattagctgctgccaaggcagcagttaatgtgtttggaccccagaaaGTAAGGCCCTTAAATCACacaaaacaaaagataaaacagtaatCACATAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1984057 True 224 lncRNA 0.36 1 35682873 35683096

Neighbor

gene id symbol gene type direction distance location
LOC118942786 NA coding upstream 45735 35636587 ~ 35637138 (+)
sh2d1ab sh21a coding upstream 172752 35503671 ~ 35510121 (+)
LOC110500296 LOC106609097 coding upstream 415073 35071370 ~ 35267800 (+)
LOC110500295 LOC106609100 coding upstream 649457 35029259 ~ 35033416 (+)
LOC110501070 wnt7b coding upstream 751702 34917692 ~ 34931171 (+)
LOC110500322 LOC106609072 coding downstream 105395 35788491 ~ 35982905 (+)
sepsecs sepsecs coding downstream 316725 35999821 ~ 36039069 (+)
lgi2a LOC106609075 coding downstream 375020 36058116 ~ 36094464 (+)
LOC118942923 NA coding downstream 437420 36120516 ~ 36123923 (+)
LOC110500325 ppp2r5b coding downstream 506293 36189389 ~ 36237829 (+)
G1732333 NA non-coding upstream 129 35682476 ~ 35682744 (+)
G1732324 NA non-coding upstream 7117 35675549 ~ 35675756 (+)
G1732323 NA non-coding upstream 7368 35675191 ~ 35675505 (+)
G1732319 NA non-coding upstream 9216 35673175 ~ 35673657 (+)
G1732317 NA non-coding upstream 10487 35670797 ~ 35672386 (+)
G1732336 NA non-coding downstream 821 35683917 ~ 35684172 (+)
G1732338 rpl34 non-coding downstream 2461 35685557 ~ 35735970 (+)
G1732467 NA non-coding downstream 182998 35866094 ~ 35883752 (+)
G1732722 NA non-coding downstream 302871 35985967 ~ 35986270 (+)
G1733069 NA non-coding downstream 851738 36534834 ~ 36549893 (+)
G1732028 NA other upstream 198519 35439289 ~ 35484354 (+)
LOC110500285 fam19a5 other upstream 1813896 33709461 ~ 33869016 (+)
G1729465 NA other upstream 2361112 33321453 ~ 33321761 (+)
LOC110500252 LOC106609149 other upstream 3520481 32153116 ~ 32162456 (+)
LOC110501063 LOC106609150 other upstream 3546177 32114413 ~ 32144886 (+)
G1732735 NA other downstream 358235 36041331 ~ 36042488 (+)
G1733187 NA other downstream 1073893 36756989 ~ 36760221 (+)
zgc:109889 LOC100194703 other downstream 1565531 37248296 ~ 37314293 (+)
G1734420 NA other downstream 1687861 37370957 ~ 37371667 (+)

Expression


Co-expression Network