Item | Value |
---|---|
gene id | G1733131 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048585.1 |
NCBI id | CM023239.2 |
chromosome length | 64935962 |
location | 36632764 ~ 36632984 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1984910 | True | 221 | lncRNA | 0.35 | 1 | 36632764 | 36632984 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
si:dkey-183c6.8 | LOC106609082 | coding | upstream | 44724 | 36523371 ~ 36588040 (+) |
LOC110500329 | LOC106609084 | coding | upstream | 174967 | 36426140 ~ 36457797 (+) |
LOC110500327 | NA | coding | upstream | 225255 | 36405999 ~ 36407509 (+) |
LOC110500325 | ppp2r5b | coding | upstream | 394935 | 36189389 ~ 36237829 (+) |
LOC118942923 | NA | coding | upstream | 508841 | 36120516 ~ 36123923 (+) |
LOC110500825 | LOC106609032 | coding | downstream | 33627 | 36666611 ~ 36756612 (+) |
htr2cl1 | LOC106609050 | coding | downstream | 583221 | 37216205 ~ 37242879 (+) |
zgc:109889 | LOC100194703 | coding | downstream | 615312 | 37248296 ~ 37314293 (+) |
si:dkey-172j4.3 | LOC106609052 | coding | downstream | 797812 | 37430796 ~ 37537824 (+) |
LOC110500311 | LOC106609056 | coding | downstream | 1016518 | 37649502 ~ 37656769 (+) |
G1733116 | NA | non-coding | upstream | 21918 | 36610616 ~ 36610846 (+) |
G1733115 | NA | non-coding | upstream | 22267 | 36610294 ~ 36610497 (+) |
G1733056 | NA | non-coding | upstream | 41885 | 36589563 ~ 36590879 (+) |
G1733094 | NA | non-coding | upstream | 55870 | 36574336 ~ 36576894 (+) |
G1733069 | NA | non-coding | upstream | 82871 | 36534834 ~ 36549893 (+) |
G1733135 | NA | non-coding | downstream | 6489 | 36639473 ~ 36639697 (+) |
G1733187 | NA | non-coding | downstream | 124005 | 36756989 ~ 36760221 (+) |
G1733206 | NA | non-coding | downstream | 157250 | 36790234 ~ 36795077 (+) |
G1733224 | NA | non-coding | downstream | 177304 | 36810288 ~ 36810676 (+) |
G1733228 | NA | non-coding | downstream | 182342 | 36815326 ~ 36815577 (+) |
G1732735 | NA | other | upstream | 590276 | 36041331 ~ 36042488 (+) |
G1732028 | NA | other | upstream | 1148410 | 35439289 ~ 35484354 (+) |
LOC110500285 | fam19a5 | other | upstream | 2763787 | 33709461 ~ 33869016 (+) |
G1729465 | NA | other | upstream | 3311003 | 33321453 ~ 33321761 (+) |
G1734420 | NA | other | downstream | 737973 | 37370957 ~ 37371667 (+) |
G1734479 | NA | other | downstream | 932444 | 37565428 ~ 37568953 (+) |
cited1 | LOC106609035 | other | downstream | 1127351 | 37758759 ~ 37765562 (+) |