G1733224


Basic Information

Item Value
gene id G1733224
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 36810288 ~ 36810676 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1985007
ctctctctacagtagattgcaattcgcccctttagcagttctgtcTTGACTGAAAAtgtaattggggatggaaattttttggtggccttcctaagccaggatttagacacggctaagacatcagggttggtggagtgtgctaaagcagtgaataaagcaaacttagggatgatgcttctgatgttaacatgcatgaaccaaagcttttacggttgcagaagtAAACAAATGAGAGCGTCCGGGGAgatacagggcctgggttaacctctacatcaccagaggaacagaggaggagtaggatgagggtacggctaaaggctataagaactggtcgtctagtgctttgggaacagagaataaaaggagcagatttctgggcgtggtaggat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1985007 True 389 lncRNA 0.46 1 36810288 36810676

Neighbor

gene id symbol gene type direction distance location
LOC110500825 LOC106609032 coding upstream 53676 36666611 ~ 36756612 (+)
si:dkey-183c6.8 LOC106609082 coding upstream 222248 36523371 ~ 36588040 (+)
LOC110500329 LOC106609084 coding upstream 352491 36426140 ~ 36457797 (+)
LOC110500327 NA coding upstream 402779 36405999 ~ 36407509 (+)
LOC110500325 ppp2r5b coding upstream 572459 36189389 ~ 36237829 (+)
htr2cl1 LOC106609050 coding downstream 405529 37216205 ~ 37242879 (+)
zgc:109889 LOC100194703 coding downstream 437620 37248296 ~ 37314293 (+)
si:dkey-172j4.3 LOC106609052 coding downstream 620120 37430796 ~ 37537824 (+)
LOC110500311 LOC106609056 coding downstream 838826 37649502 ~ 37656769 (+)
LOC110500309 LOC106604291 coding downstream 890765 37701441 ~ 37703347 (+)
G1733206 NA non-coding upstream 15211 36790234 ~ 36795077 (+)
G1733187 NA non-coding upstream 50067 36756989 ~ 36760221 (+)
G1733135 NA non-coding upstream 170591 36639473 ~ 36639697 (+)
G1733131 NA non-coding upstream 177304 36632764 ~ 36632984 (+)
G1733116 NA non-coding upstream 199442 36610616 ~ 36610846 (+)
G1733228 NA non-coding downstream 4650 36815326 ~ 36815577 (+)
G1733257 NA non-coding downstream 52753 36863429 ~ 36864198 (+)
G1733258 NA non-coding downstream 53716 36864392 ~ 36864607 (+)
G1733267 NA non-coding downstream 68544 36879220 ~ 36879673 (+)
G1733269 NA non-coding downstream 71377 36882053 ~ 36882346 (+)
G1732735 NA other upstream 767800 36041331 ~ 36042488 (+)
G1732028 NA other upstream 1325934 35439289 ~ 35484354 (+)
LOC110500285 fam19a5 other upstream 2941311 33709461 ~ 33869016 (+)
G1734420 NA other downstream 560281 37370957 ~ 37371667 (+)
G1734479 NA other downstream 754752 37565428 ~ 37568953 (+)
cited1 LOC106609035 other downstream 949659 37758759 ~ 37765562 (+)
G1734960 NA other downstream 1232415 38043091 ~ 38045066 (+)

Expression


Co-expression Network