G1733267


Basic Information

Item Value
gene id G1733267
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 36879220 ~ 36879673 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1985054
GGTACACGAACAGTCCGGTGGTCGAGGCAATCTGTAGAACGATCACCACAATCACCACCATTGCGATCCACATCTTGGATGGCGCGGCATCGCGACGCGTGTTTGCCGTGGCCGGGACCATCATATACGTTGTGGATTCGTTGCTGACGCTTCTGAAGTAATCCTGCTGCTGCTGAAGGCTGTTCGGCGTGGCCATGGTAGCATTCCCGACACATGTGTATCCGTCAAAAACAACAACGAAGTCAAGGACGGGACGGGTATATTAAATCAATGCCCAGGCTACATGAGCTTGTCTTATGCTTTTCGATTCGGAAAGAGCCCCTTCATTCAATTTACCgtgtgaggaggagaaggagggtaaCCACTCCAGTCGTTTATCCTATTCCTCGTATTTCTTCCTCTTTGCCCCGACGACTTGAGAGAAAGTTGACTGGGGTAACCACGTTCCAATCCT

Function

NR:

description
tumor necrosis factor ligand superfamily member 10-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1985054 True 454 lncRNA 0.51 1 36879220 36879673

Neighbor

gene id symbol gene type direction distance location
LOC110500825 LOC106609032 coding upstream 122608 36666611 ~ 36756612 (+)
si:dkey-183c6.8 LOC106609082 coding upstream 291180 36523371 ~ 36588040 (+)
LOC110500329 LOC106609084 coding upstream 421423 36426140 ~ 36457797 (+)
LOC110500327 NA coding upstream 471711 36405999 ~ 36407509 (+)
LOC110500325 ppp2r5b coding upstream 641391 36189389 ~ 36237829 (+)
htr2cl1 LOC106609050 coding downstream 336532 37216205 ~ 37242879 (+)
zgc:109889 LOC100194703 coding downstream 368623 37248296 ~ 37314293 (+)
si:dkey-172j4.3 LOC106609052 coding downstream 551123 37430796 ~ 37537824 (+)
LOC110500311 LOC106609056 coding downstream 769829 37649502 ~ 37656769 (+)
LOC110500309 LOC106604291 coding downstream 821768 37701441 ~ 37703347 (+)
G1733258 NA non-coding upstream 14613 36864392 ~ 36864607 (+)
G1733257 NA non-coding upstream 15022 36863429 ~ 36864198 (+)
G1733228 NA non-coding upstream 63643 36815326 ~ 36815577 (+)
G1733224 NA non-coding upstream 68544 36810288 ~ 36810676 (+)
G1733206 NA non-coding upstream 84143 36790234 ~ 36795077 (+)
G1733269 NA non-coding downstream 2380 36882053 ~ 36882346 (+)
G1733876 NA non-coding downstream 40297 36919970 ~ 36920363 (+)
G1734192 NA non-coding downstream 294399 37174072 ~ 37174391 (+)
G1734197 NA non-coding downstream 299103 37178776 ~ 37179061 (+)
G1734201 NA non-coding downstream 300228 37179901 ~ 37180117 (+)
G1733187 NA other upstream 120337 36756989 ~ 36760221 (+)
G1732735 NA other upstream 836732 36041331 ~ 36042488 (+)
G1732028 NA other upstream 1394866 35439289 ~ 35484354 (+)
LOC110500285 fam19a5 other upstream 3010243 33709461 ~ 33869016 (+)
G1734420 NA other downstream 491284 37370957 ~ 37371667 (+)
G1734479 NA other downstream 685755 37565428 ~ 37568953 (+)
cited1 LOC106609035 other downstream 880662 37758759 ~ 37765562 (+)
G1734960 NA other downstream 1163418 38043091 ~ 38045066 (+)

Expression


Co-expression Network