G1734205


Basic Information

Item Value
gene id G1734205
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 37182405 ~ 37182622 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1986083
cttccaatgtttgtctatggagattgcatggctgcgtgctcgattttatgcacctgtcagcaacgggtgtagctgaaatagccaaatccactaatttaaaggggtgtcatctacttttgaccatgtagtGTAGCTGGCCCGTTTCTACTGGTGAGATGAATAAACTCTCGTATTTCCATGTAGTGAGGTAATTCTAAATGTTTATGACAGATGTGATA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1986083 True 218 lncRNA 0.41 1 37182405 37182622

Neighbor

gene id symbol gene type direction distance location
LOC110500825 LOC106609032 coding upstream 425793 36666611 ~ 36756612 (+)
si:dkey-183c6.8 LOC106609082 coding upstream 594365 36523371 ~ 36588040 (+)
LOC110500329 LOC106609084 coding upstream 724608 36426140 ~ 36457797 (+)
LOC110500327 NA coding upstream 774896 36405999 ~ 36407509 (+)
LOC110500325 ppp2r5b coding upstream 944576 36189389 ~ 36237829 (+)
htr2cl1 LOC106609050 coding downstream 33583 37216205 ~ 37242879 (+)
zgc:109889 LOC100194703 coding downstream 65674 37248296 ~ 37314293 (+)
si:dkey-172j4.3 LOC106609052 coding downstream 248174 37430796 ~ 37537824 (+)
LOC110500311 LOC106609056 coding downstream 466880 37649502 ~ 37656769 (+)
LOC110500309 LOC106604291 coding downstream 518819 37701441 ~ 37703347 (+)
G1734201 NA non-coding upstream 2288 37179901 ~ 37180117 (+)
G1734197 NA non-coding upstream 3344 37178776 ~ 37179061 (+)
G1734192 NA non-coding upstream 8014 37174072 ~ 37174391 (+)
G1733876 NA non-coding upstream 262042 36919970 ~ 36920363 (+)
G1733269 NA non-coding upstream 300059 36882053 ~ 36882346 (+)
G1734227 NA non-coding downstream 13991 37196613 ~ 37196945 (+)
G1734232 NA non-coding downstream 17564 37200186 ~ 37200425 (+)
G1734411 NA non-coding downstream 175555 37358177 ~ 37358655 (+)
G1733187 NA other upstream 423522 36756989 ~ 36760221 (+)
G1732735 NA other upstream 1139917 36041331 ~ 36042488 (+)
G1732028 NA other upstream 1698051 35439289 ~ 35484354 (+)
LOC110500285 fam19a5 other upstream 3313428 33709461 ~ 33869016 (+)
G1734420 NA other downstream 188335 37370957 ~ 37371667 (+)
G1734479 NA other downstream 382806 37565428 ~ 37568953 (+)
cited1 LOC106609035 other downstream 577713 37758759 ~ 37765562 (+)
G1734960 NA other downstream 860469 38043091 ~ 38045066 (+)

Expression


Co-expression Network