G1734227


Basic Information

Item Value
gene id G1734227
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 37196613 ~ 37196945 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1986105
cctaaagactctcagaacatgagataaaagattctctggtctgatgaaaccaagattgaactatttggcctgaatgccaagcgtcacgtctggaggaaacctggcaccatccctatggtgaagcatagtggtggcagcatcatgttgtttgaatgtttttcagaggcagggactgggagactagtcaagattgaggcaaagatgaacggcgcaaagtacagagagatccttgattaaaaccttcTCAAGAGTGCTCTGGACCTCTACTGgcgcgaaggttcaccttccaacaggccaatgaccctaagctcacagccaaagacaacgcaggag

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1986105 True 333 lncRNA 0.48 1 37196613 37196945

Neighbor

gene id symbol gene type direction distance location
LOC110500825 LOC106609032 coding upstream 440001 36666611 ~ 36756612 (+)
si:dkey-183c6.8 LOC106609082 coding upstream 608573 36523371 ~ 36588040 (+)
LOC110500329 LOC106609084 coding upstream 738816 36426140 ~ 36457797 (+)
LOC110500327 NA coding upstream 789104 36405999 ~ 36407509 (+)
LOC110500325 ppp2r5b coding upstream 958784 36189389 ~ 36237829 (+)
htr2cl1 LOC106609050 coding downstream 19260 37216205 ~ 37242879 (+)
zgc:109889 LOC100194703 coding downstream 51351 37248296 ~ 37314293 (+)
si:dkey-172j4.3 LOC106609052 coding downstream 233851 37430796 ~ 37537824 (+)
LOC110500311 LOC106609056 coding downstream 452557 37649502 ~ 37656769 (+)
LOC110500309 LOC106604291 coding downstream 504496 37701441 ~ 37703347 (+)
G1734205 NA non-coding upstream 13991 37182405 ~ 37182622 (+)
G1734201 NA non-coding upstream 16496 37179901 ~ 37180117 (+)
G1734197 NA non-coding upstream 17552 37178776 ~ 37179061 (+)
G1734192 NA non-coding upstream 22222 37174072 ~ 37174391 (+)
G1733876 NA non-coding upstream 276250 36919970 ~ 36920363 (+)
G1734232 NA non-coding downstream 3241 37200186 ~ 37200425 (+)
G1734411 NA non-coding downstream 161232 37358177 ~ 37358655 (+)
G1734424 NA non-coding downstream 179684 37376629 ~ 37376859 (+)
G1733187 NA other upstream 437730 36756989 ~ 36760221 (+)
G1732735 NA other upstream 1154125 36041331 ~ 36042488 (+)
G1732028 NA other upstream 1712259 35439289 ~ 35484354 (+)
LOC110500285 fam19a5 other upstream 3327636 33709461 ~ 33869016 (+)
G1734420 NA other downstream 174012 37370957 ~ 37371667 (+)
G1734479 NA other downstream 368483 37565428 ~ 37568953 (+)
cited1 LOC106609035 other downstream 563390 37758759 ~ 37765562 (+)
G1734960 NA other downstream 846146 38043091 ~ 38045066 (+)

Expression


Co-expression Network