G1734411


Basic Information

Item Value
gene id G1734411
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 37358177 ~ 37358655 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1986303
ggtcaaggtttggctttttcaagagaggctttattactgccacttttagtgagtttggtatacatccggtggatagagagccgtttattatgttcaacataggagggccaagcacaggaagcagctctttcagtagtttagttggaatagggtccagtatgcagcttgaaggtttagaggtcatgattattttcatcattgtgtcaagaaatatagtactaaaacacttgagcgtctctcttgatcctaggacctggcagagttgtgcagactcaggacaactgagctttgaaggaatacgcagatttaaagaggagtccgtaatttgctttctaataatcgtgatcttttcctcaaagaagttcctGAATTTaccactgctgaagtgaaagccatcctatcttggggaatgctgctttttagttagctttgcgacagtatcaaaaaggaatttcggattgttcttattttcctaaatt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1986303 True 479 lncRNA 0.40 1 37358177 37358655

Neighbor

gene id symbol gene type direction distance location
zgc:109889 LOC100194703 coding upstream 46937 37248296 ~ 37314293 (+)
htr2cl1 LOC106609050 coding upstream 115304 37216205 ~ 37242879 (+)
LOC110500825 LOC106609032 coding upstream 601565 36666611 ~ 36756612 (+)
si:dkey-183c6.8 LOC106609082 coding upstream 770137 36523371 ~ 36588040 (+)
LOC110500329 LOC106609084 coding upstream 900380 36426140 ~ 36457797 (+)
si:dkey-172j4.3 LOC106609052 coding downstream 72141 37430796 ~ 37537824 (+)
LOC110500311 LOC106609056 coding downstream 290847 37649502 ~ 37656769 (+)
LOC110500309 LOC106604291 coding downstream 342786 37701441 ~ 37703347 (+)
hdac8 hdac8 coding downstream 362463 37721118 ~ 37757590 (+)
cited1 LOC106609035 coding downstream 400104 37758759 ~ 37765562 (+)
G1734232 NA non-coding upstream 157752 37200186 ~ 37200425 (+)
G1734227 NA non-coding upstream 161232 37196613 ~ 37196945 (+)
G1734205 NA non-coding upstream 175555 37182405 ~ 37182622 (+)
G1734424 NA non-coding downstream 17974 37376629 ~ 37376859 (+)
G1734425 NA non-coding downstream 18302 37376957 ~ 37377281 (+)
G1734427 NA non-coding downstream 33850 37392505 ~ 37392720 (+)
G1734435 NA non-coding downstream 47914 37406569 ~ 37406822 (+)
G1734461 NA non-coding downstream 101900 37460555 ~ 37461176 (+)
G1733187 NA other upstream 599294 36756989 ~ 36760221 (+)
LOC110500325 ppp2r5b other upstream 1121912 36189389 ~ 36237829 (+)
G1732735 NA other upstream 1315689 36041331 ~ 36042488 (+)
G1732028 NA other upstream 1873823 35439289 ~ 35484354 (+)
G1734420 NA other downstream 12302 37370957 ~ 37371667 (+)
G1734479 NA other downstream 206773 37565428 ~ 37568953 (+)
G1734960 NA other downstream 684436 38043091 ~ 38045066 (+)
G1734961 NA other downstream 686453 38045108 ~ 38046506 (+)

Expression


Co-expression Network