Gene
RNA
| Item | Value |
|---|---|
| gene id | G1734427 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 37392505 ~ 37392720 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1986323 | True | 216 | lncRNA | 0.47 | 1 | 37392505 | 37392720 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zgc:109889 | LOC100194703 | coding | upstream | 81265 | 37248296 ~ 37314293 (+) |
| htr2cl1 | LOC106609050 | coding | upstream | 149632 | 37216205 ~ 37242879 (+) |
| LOC110500825 | LOC106609032 | coding | upstream | 635893 | 36666611 ~ 36756612 (+) |
| si:dkey-183c6.8 | LOC106609082 | coding | upstream | 804465 | 36523371 ~ 36588040 (+) |
| LOC110500329 | LOC106609084 | coding | upstream | 934708 | 36426140 ~ 36457797 (+) |
| si:dkey-172j4.3 | LOC106609052 | coding | downstream | 38076 | 37430796 ~ 37537824 (+) |
| LOC110500311 | LOC106609056 | coding | downstream | 256782 | 37649502 ~ 37656769 (+) |
| LOC110500309 | LOC106604291 | coding | downstream | 308721 | 37701441 ~ 37703347 (+) |
| hdac8 | hdac8 | coding | downstream | 328398 | 37721118 ~ 37757590 (+) |
| cited1 | LOC106609035 | coding | downstream | 366039 | 37758759 ~ 37765562 (+) |
| G1734425 | NA | non-coding | upstream | 15224 | 37376957 ~ 37377281 (+) |
| G1734424 | NA | non-coding | upstream | 15646 | 37376629 ~ 37376859 (+) |
| G1734411 | NA | non-coding | upstream | 33850 | 37358177 ~ 37358655 (+) |
| G1734435 | NA | non-coding | downstream | 13849 | 37406569 ~ 37406822 (+) |
| G1734461 | NA | non-coding | downstream | 67835 | 37460555 ~ 37461176 (+) |
| G1734477 | NA | non-coding | downstream | 152429 | 37545149 ~ 37550449 (+) |
| G1734478 | NA | non-coding | downstream | 159397 | 37552117 ~ 37553314 (+) |
| G1734548 | NA | non-coding | downstream | 221858 | 37614578 ~ 37614813 (+) |
| G1734420 | NA | other | upstream | 20838 | 37370957 ~ 37371667 (+) |
| G1733187 | NA | other | upstream | 633622 | 36756989 ~ 36760221 (+) |
| LOC110500325 | ppp2r5b | other | upstream | 1156240 | 36189389 ~ 36237829 (+) |
| G1732735 | NA | other | upstream | 1350017 | 36041331 ~ 36042488 (+) |
| G1734479 | NA | other | downstream | 172708 | 37565428 ~ 37568953 (+) |
| G1734960 | NA | other | downstream | 650371 | 38043091 ~ 38045066 (+) |
| G1734961 | NA | other | downstream | 652388 | 38045108 ~ 38046506 (+) |
| LOC110500301 | LOC106609063 | other | downstream | 684831 | 38076983 ~ 38083972 (+) |
