G1734461



Basic Information


Item Value
gene id G1734461
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 37460555 ~ 37461176 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1986357
TCCtctttcttcatccctctctcttttcctggcAGTCCGCATCTCTAAGTCTGTCAATGTGAGTGTACAGGCCTGCTGTGTTACAAGCTGTTGGCTGCCAgtttcacacaaacacacgcactcacacacacacacacacacacacacacacacacacacacacacacacacacgcactcaaacacacacacacacatacacacacacaaacacgcaaacacacgcactcacacacactcacacacaaacacacgcacacacacacacacatgcacacacgcactcacacgcattcacacacacacgcactcaaacacacacacacacatacacacacacaaacacgcaaacacacgcacacacactcacacacacgcactcacacacacacacgtgtgttcacacacgcacacgcagtcacacgcactcacacacacacacaca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1986357 True 444 lncRNA 0.50 2 37460555 37461176

Neighbor


gene id symbol gene type direction distance location
zgc:109889 LOC100194703 coding upstream 149315 37248296 ~ 37314293 (+)
htr2cl1 LOC106609050 coding upstream 217682 37216205 ~ 37242879 (+)
LOC110500825 LOC106609032 coding upstream 703943 36666611 ~ 36756612 (+)
si:dkey-183c6.8 LOC106609082 coding upstream 872515 36523371 ~ 36588040 (+)
LOC110500329 LOC106609084 coding upstream 1002758 36426140 ~ 36457797 (+)
LOC110500311 LOC106609056 coding downstream 188326 37649502 ~ 37656769 (+)
LOC110500309 LOC106604291 coding downstream 240265 37701441 ~ 37703347 (+)
hdac8 hdac8 coding downstream 259942 37721118 ~ 37757590 (+)
cited1 LOC106609035 coding downstream 297583 37758759 ~ 37765562 (+)
rs4x rs4x coding downstream 305478 37766654 ~ 37772954 (+)
G1734435 NA non-coding upstream 53733 37406569 ~ 37406822 (+)
G1734427 NA non-coding upstream 67835 37392505 ~ 37392720 (+)
G1734425 NA non-coding upstream 83274 37376957 ~ 37377281 (+)
G1734424 NA non-coding upstream 83696 37376629 ~ 37376859 (+)
G1734411 NA non-coding upstream 101900 37358177 ~ 37358655 (+)
G1734477 NA non-coding downstream 83973 37545149 ~ 37550449 (+)
G1734478 NA non-coding downstream 90941 37552117 ~ 37553314 (+)
G1734548 NA non-coding downstream 153402 37614578 ~ 37614813 (+)
G1734550 NA non-coding downstream 158771 37619947 ~ 37620381 (+)
G1734420 NA other upstream 88888 37370957 ~ 37371667 (+)
G1733187 NA other upstream 701672 36756989 ~ 36760221 (+)
LOC110500325 ppp2r5b other upstream 1224290 36189389 ~ 36237829 (+)
G1732735 NA other upstream 1418067 36041331 ~ 36042488 (+)
G1734479 NA other downstream 104252 37565428 ~ 37568953 (+)
G1734960 NA other downstream 581915 38043091 ~ 38045066 (+)
G1734961 NA other downstream 583932 38045108 ~ 38046506 (+)
LOC110500301 LOC106609063 other downstream 616375 38076983 ~ 38083972 (+)

Expression



Co-expression Network