G1734478


Basic Information

Item Value
gene id G1734478
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 37552117 ~ 37553314 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1986375
TGGACATAATCTCAAAACAGGTTAcataatacacaaacacacactaccactCACCATGTGTTGTACAGGCATGGGTGCAGGGGCCATGGGAGCAGGGTTCCAGGCCGTGGTGCTAGTCATGGTCTTGCTCTGCCAGTTGTGTCCCCCAGTTAGCTTCTTCTCTCCAGGCTGACTCCACTGCATGTCTGGCTTCTTGGCTGGGGCTCCTCCGAACTGCAGATCTgaggacgagagagagcgagggatggtgagacagaaagaggagagcaagagaaagaaagggaacaAGGAAGTGAGTATGAGAAAGAAGAGAGCAAAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1986375 True 320 lncRNA 0.52 2 37552117 37553314

Neighbor

gene id symbol gene type direction distance location
si:dkey-172j4.3 LOC106609052 coding upstream 14293 37430796 ~ 37537824 (+)
zgc:109889 LOC100194703 coding upstream 240877 37248296 ~ 37314293 (+)
htr2cl1 LOC106609050 coding upstream 309244 37216205 ~ 37242879 (+)
LOC110500825 LOC106609032 coding upstream 795505 36666611 ~ 36756612 (+)
si:dkey-183c6.8 LOC106609082 coding upstream 964077 36523371 ~ 36588040 (+)
LOC110500311 LOC106609056 coding downstream 96188 37649502 ~ 37656769 (+)
LOC110500309 LOC106604291 coding downstream 148127 37701441 ~ 37703347 (+)
hdac8 hdac8 coding downstream 167804 37721118 ~ 37757590 (+)
cited1 LOC106609035 coding downstream 205445 37758759 ~ 37765562 (+)
rs4x rs4x coding downstream 213340 37766654 ~ 37772954 (+)
G1734477 NA non-coding upstream 1668 37545149 ~ 37550449 (+)
G1734461 NA non-coding upstream 90941 37460555 ~ 37461176 (+)
G1734435 NA non-coding upstream 145295 37406569 ~ 37406822 (+)
G1734427 NA non-coding upstream 159397 37392505 ~ 37392720 (+)
G1734425 NA non-coding upstream 174836 37376957 ~ 37377281 (+)
G1734548 NA non-coding downstream 61264 37614578 ~ 37614813 (+)
G1734550 NA non-coding downstream 66633 37619947 ~ 37620381 (+)
G1734553 NA non-coding downstream 103631 37656945 ~ 37657310 (+)
G1734551 NA non-coding downstream 104907 37658221 ~ 37658728 (+)
G1734420 NA other upstream 180450 37370957 ~ 37371667 (+)
G1733187 NA other upstream 793234 36756989 ~ 36760221 (+)
LOC110500325 ppp2r5b other upstream 1315852 36189389 ~ 36237829 (+)
G1732735 NA other upstream 1509629 36041331 ~ 36042488 (+)
G1734479 NA other downstream 12114 37565428 ~ 37568953 (+)
G1734960 NA other downstream 489777 38043091 ~ 38045066 (+)
G1734961 NA other downstream 491794 38045108 ~ 38046506 (+)
LOC110500301 LOC106609063 other downstream 524237 38076983 ~ 38083972 (+)

Expression


Co-expression Network