G1734479


Basic Information

Item Value
gene id G1734479
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 37565428 ~ 37568953 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1986376
TTTGCACAACTGTTAGGGGATCATATGTTCATTGATTTTGTCATAATTTCAcaagctcagtaaatttggttgAGAATCTTTAACAGACAGCAATCTtaaaacggtgtgtgtgtgtgtgtgtgtgtgtgcgatgtcTATCTTTATGTGTGTGGGTAAGATGAcgtaatacactgctcaaaaaaataaagggaacacttaaacaacacaatgtaactccaagtcaatcacacttctgtgaaatcaaactgttcacttaggaagcaacactgattgacaatacatttcacatgctgttgtgcaaatggaatagacaacaggtggaaaatataggcaattagcaagacacccccaataaaggagtggttctgcaggtggtgactgcagaccacttctcagttcctatgcttcctggctgatgttttggttacttttgaatgctggcggtgctttcactctagtggtagcatgagacggcgtctacaacccacacaagtggctcaggtagtgcagctcatctaggatggcacatcaatgcgagctgtggcaagaaggtttgctgtgtctgtcagcgtagtgtccagagcatggaggcgctaccaggagacaggccagtacatcaggagacgtggaggaggccgtaggagggcaacaacccagcagcaggactgctacctcctcctttgtgcaaggaggagcactgcaaaatgacctccagcaggccacaaatgtgcatgtgtctgctcaaacggtcagaaacagactccatgagggtggtatgaggggccgacgtccacaggtgggggttgtgcttacagcccaacaccgtgcaggacgtttggcatttgccagaaaaCACCAAGactggcaaattcgccactggcgccctgtgctcttcacagatgaaagcaggttcacactgagcacatgtgacagacgtgacagagtctggagacgccgtggagaacgttctgctgcctgcaacatcctccagcatgacaggtttggcggtgggtcagtcatggtctggggtggcctttctttgggggggccgcacagccctccatgtgctcgccagaggtagcctgactgccattaggtacagagatgagatcctcagaccccttgagaccatatgctggtgcggttggcactgggttcctcctaatgcaagacaatgctagacctcatgtggctggagtgtgtcatcagttcctgcaagaggaaggcattgatgctatggactggcccgtccgttccccagacctgaatccaattgagcacatcatgtctcgctccatccaccaacgccacgttgcaccacagactgtccaggagttggcggaagctttagtccaggtctgggaggagatccctcaggagaatatccgccacctcatcaggagcatgcccaggcgttatagggaggtcatacaggcacgtggaggccacacacactactgagcctcattttgacttgttttaaggacattacatcaaagttggatcagcttgtagtgtggttttccactttaattttgtgagactccaaatccagacctccatgggttgatcaatttgatttccattgataatttgtgtgattgtagtcagcacattcaactatgtaaagaaaaaagtatttaataagaatatttaattcattcagatctaggatgtgttattttagtgttccctttatttttttgagcagtgtacaagaTATCATCAAGAAGCATAACTATTCAAATAATTTCATTCAGTTTCATTGACTCCAAGTGCCGGGAAAGTTATCAAGATATATTTAGGGAAACACATCGGCACACATGATGCCCTCGGTCTTACAGCAACATTCCAGATTGAGTCGATAAGACCTAAACAACCTCCTCATACATGATTTAATCTTTGTCTAAGAATGCTATATGTGACATAAGAATAGATTAGGGTCGGTACCGGGAGGCTGTGTGTTTTGacttgcgcttgatggtttttgcgactgcacttgaagaaacttcaagTTCTTAACATTTTAcagattgactgatcttcatttcttaatgtaatgatggactatcatttctctttgcttatttcagctgttcttgccataatatggacttggtatttttgtataccacccctaccttgtcacaacacaactgattggctcaaacgcaacaAGGAagaaaattccacaaatgtacttttaacaaggcacacctgctaattgaaatggattccaggtgactacctcatgaagctggttgagagaatgccaagtatgcaaagctgtcatcaacgcagagggtggctactttgaatctcaaatatattttgatttgtttactatatgattccatatgtgttatttcatagttgtgatgtctttactattattctacaatgtagataatagtaaaaacaaagaaaaacctggaatgagtaagtgtccaaacatttgactggtacctTATGTAAATATGAAAAAGTCATTACGGGGCATTGTGTTGAGCATGTGCGCCCGTGTCcacgtgcatgcctgtgtgtacCTCTGCTACTTTGAGAAACTCTGACAGCTTGGTCATCCTGTAAAGGAACTTCTTATAGATGTCCAATGCGTCTTTACACTGACCCTTCTTCATATCAAAATATTTctCCAGTAAGTTGATGACGCCCTCGTTGTAGGCAGCAAACAGACGGATGGAGTCCTTGAACAACAGCATGAAGGCTGAGTTGATCACCCCGTTAGTTAACTCATTGGGGTTGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1986376 True 2764 TUCP 0.45 2 37565428 37568953

Neighbor

gene id symbol gene type direction distance location
si:dkey-172j4.3 LOC106609052 coding upstream 27604 37430796 ~ 37537824 (+)
zgc:109889 LOC100194703 coding upstream 254188 37248296 ~ 37314293 (+)
htr2cl1 LOC106609050 coding upstream 322555 37216205 ~ 37242879 (+)
LOC110500825 LOC106609032 coding upstream 808816 36666611 ~ 36756612 (+)
si:dkey-183c6.8 LOC106609082 coding upstream 977388 36523371 ~ 36588040 (+)
LOC110500311 LOC106609056 coding downstream 80549 37649502 ~ 37656769 (+)
LOC110500309 LOC106604291 coding downstream 132488 37701441 ~ 37703347 (+)
hdac8 hdac8 coding downstream 152165 37721118 ~ 37757590 (+)
cited1 LOC106609035 coding downstream 189806 37758759 ~ 37765562 (+)
rs4x rs4x coding downstream 197701 37766654 ~ 37772954 (+)
G1734478 NA non-coding upstream 12114 37552117 ~ 37553314 (+)
G1734477 NA non-coding upstream 14979 37545149 ~ 37550449 (+)
G1734461 NA non-coding upstream 104252 37460555 ~ 37461176 (+)
G1734435 NA non-coding upstream 158606 37406569 ~ 37406822 (+)
G1734427 NA non-coding upstream 172708 37392505 ~ 37392720 (+)
G1734548 NA non-coding downstream 45625 37614578 ~ 37614813 (+)
G1734550 NA non-coding downstream 50994 37619947 ~ 37620381 (+)
G1734553 NA non-coding downstream 87992 37656945 ~ 37657310 (+)
G1734551 NA non-coding downstream 89268 37658221 ~ 37658728 (+)
G1734420 NA other upstream 193761 37370957 ~ 37371667 (+)
G1733187 NA other upstream 806545 36756989 ~ 36760221 (+)
LOC110500325 ppp2r5b other upstream 1329163 36189389 ~ 36237829 (+)
G1732735 NA other upstream 1522940 36041331 ~ 36042488 (+)
G1734960 NA other downstream 474138 38043091 ~ 38045066 (+)
G1734961 NA other downstream 476155 38045108 ~ 38046506 (+)
LOC110500301 LOC106609063 other downstream 508598 38076983 ~ 38083972 (+)
arrb2b LOC106608931 other downstream 1299014 38867935 ~ 38939119 (+)

Expression

G1734479 Expression in all Baseline Samples

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G1734479 Expression in each Bioproject

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G1734479 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 60.
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Co-expression Network