G1734548



Basic Information


Item Value
gene id G1734548
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 37614578 ~ 37614813 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1986447
gccctatatcactctccttcttggtcaaatagcccctacacagcctggaggtgtgttgggtcattgtcctgttgaaaaacaaatgatagtcccactaagcgcaaaccagatgggatggcgtatcgctgcagaatgctgtggtagccatgctggttaagtgttccttgaattctaaataaatcactgacagtgtcaccagcaaagcacccgcacacatcacacctcctcttccatgc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1986447 True 236 lncRNA 0.48 1 37614578 37614813

Neighbor


gene id symbol gene type direction distance location
si:dkey-172j4.3 LOC106609052 coding upstream 76754 37430796 ~ 37537824 (+)
zgc:109889 LOC100194703 coding upstream 303338 37248296 ~ 37314293 (+)
htr2cl1 LOC106609050 coding upstream 371705 37216205 ~ 37242879 (+)
LOC110500825 LOC106609032 coding upstream 857966 36666611 ~ 36756612 (+)
si:dkey-183c6.8 LOC106609082 coding upstream 1026538 36523371 ~ 36588040 (+)
LOC110500311 LOC106609056 coding downstream 34689 37649502 ~ 37656769 (+)
LOC110500309 LOC106604291 coding downstream 86628 37701441 ~ 37703347 (+)
hdac8 hdac8 coding downstream 106305 37721118 ~ 37757590 (+)
cited1 LOC106609035 coding downstream 143946 37758759 ~ 37765562 (+)
rs4x rs4x coding downstream 151841 37766654 ~ 37772954 (+)
G1734478 NA non-coding upstream 61264 37552117 ~ 37553314 (+)
G1734477 NA non-coding upstream 64129 37545149 ~ 37550449 (+)
G1734461 NA non-coding upstream 153402 37460555 ~ 37461176 (+)
G1734435 NA non-coding upstream 207756 37406569 ~ 37406822 (+)
G1734427 NA non-coding upstream 221858 37392505 ~ 37392720 (+)
G1734550 NA non-coding downstream 5134 37619947 ~ 37620381 (+)
G1734553 NA non-coding downstream 42132 37656945 ~ 37657310 (+)
G1734551 NA non-coding downstream 43408 37658221 ~ 37658728 (+)
G1734585 NA non-coding downstream 71753 37686566 ~ 37686803 (+)
G1734479 NA other upstream 45625 37565428 ~ 37568953 (+)
G1734420 NA other upstream 242911 37370957 ~ 37371667 (+)
G1733187 NA other upstream 855695 36756989 ~ 36760221 (+)
LOC110500325 ppp2r5b other upstream 1378313 36189389 ~ 36237829 (+)
G1734960 NA other downstream 428278 38043091 ~ 38045066 (+)
G1734961 NA other downstream 430295 38045108 ~ 38046506 (+)
LOC110500301 LOC106609063 other downstream 462738 38076983 ~ 38083972 (+)
arrb2b LOC106608931 other downstream 1253154 38867935 ~ 38939119 (+)

Expression



Co-expression Network