Gene
RNA
| Item | Value |
|---|---|
| gene id | G1734550 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 37619947 ~ 37620381 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1986449 | True | 435 | lncRNA | 0.36 | 1 | 37619947 | 37620381 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-172j4.3 | LOC106609052 | coding | upstream | 82123 | 37430796 ~ 37537824 (+) |
| zgc:109889 | LOC100194703 | coding | upstream | 308707 | 37248296 ~ 37314293 (+) |
| htr2cl1 | LOC106609050 | coding | upstream | 377074 | 37216205 ~ 37242879 (+) |
| LOC110500825 | LOC106609032 | coding | upstream | 863335 | 36666611 ~ 36756612 (+) |
| si:dkey-183c6.8 | LOC106609082 | coding | upstream | 1031907 | 36523371 ~ 36588040 (+) |
| LOC110500311 | LOC106609056 | coding | downstream | 29121 | 37649502 ~ 37656769 (+) |
| LOC110500309 | LOC106604291 | coding | downstream | 81060 | 37701441 ~ 37703347 (+) |
| hdac8 | hdac8 | coding | downstream | 100737 | 37721118 ~ 37757590 (+) |
| cited1 | LOC106609035 | coding | downstream | 138378 | 37758759 ~ 37765562 (+) |
| rs4x | rs4x | coding | downstream | 146273 | 37766654 ~ 37772954 (+) |
| G1734548 | NA | non-coding | upstream | 5134 | 37614578 ~ 37614813 (+) |
| G1734478 | NA | non-coding | upstream | 66633 | 37552117 ~ 37553314 (+) |
| G1734477 | NA | non-coding | upstream | 69498 | 37545149 ~ 37550449 (+) |
| G1734461 | NA | non-coding | upstream | 158771 | 37460555 ~ 37461176 (+) |
| G1734435 | NA | non-coding | upstream | 213125 | 37406569 ~ 37406822 (+) |
| G1734553 | NA | non-coding | downstream | 36564 | 37656945 ~ 37657310 (+) |
| G1734551 | NA | non-coding | downstream | 37840 | 37658221 ~ 37658728 (+) |
| G1734585 | NA | non-coding | downstream | 66185 | 37686566 ~ 37686803 (+) |
| G1734587 | NA | non-coding | downstream | 69486 | 37689867 ~ 37690069 (+) |
| G1734479 | NA | other | upstream | 50994 | 37565428 ~ 37568953 (+) |
| G1734420 | NA | other | upstream | 248280 | 37370957 ~ 37371667 (+) |
| G1733187 | NA | other | upstream | 861064 | 36756989 ~ 36760221 (+) |
| LOC110500325 | ppp2r5b | other | upstream | 1383682 | 36189389 ~ 36237829 (+) |
| G1734960 | NA | other | downstream | 422710 | 38043091 ~ 38045066 (+) |
| G1734961 | NA | other | downstream | 424727 | 38045108 ~ 38046506 (+) |
| LOC110500301 | LOC106609063 | other | downstream | 457170 | 38076983 ~ 38083972 (+) |
| arrb2b | LOC106608931 | other | downstream | 1247586 | 38867935 ~ 38939119 (+) |
