G1734553


Basic Information

Item Value
gene id G1734553
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 37656945 ~ 37657310 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1986464
attattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggttcgagatactgttgtgaagaagtttaaagccggatttggatacaaaaatatttcccaagctttaaacatcccaaggagcactatgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggcc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1986464 True 366 lncRNA 0.42 1 37656945 37657310

Neighbor

gene id symbol gene type direction distance location
LOC110500311 LOC106609056 coding upstream 793 37649502 ~ 37656769 (+)
si:dkey-172j4.3 LOC106609052 coding upstream 119121 37430796 ~ 37537824 (+)
zgc:109889 LOC100194703 coding upstream 345705 37248296 ~ 37314293 (+)
htr2cl1 LOC106609050 coding upstream 414072 37216205 ~ 37242879 (+)
LOC110500825 LOC106609032 coding upstream 900333 36666611 ~ 36756612 (+)
LOC110500309 LOC106604291 coding downstream 44131 37701441 ~ 37703347 (+)
hdac8 hdac8 coding downstream 63808 37721118 ~ 37757590 (+)
cited1 LOC106609035 coding downstream 101449 37758759 ~ 37765562 (+)
rs4x rs4x coding downstream 109344 37766654 ~ 37772954 (+)
LOC118943013 NA coding downstream 110832 37768142 ~ 37768217 (+)
G1734550 NA non-coding upstream 36564 37619947 ~ 37620381 (+)
G1734548 NA non-coding upstream 42132 37614578 ~ 37614813 (+)
G1734478 NA non-coding upstream 103631 37552117 ~ 37553314 (+)
G1734477 NA non-coding upstream 106496 37545149 ~ 37550449 (+)
G1734551 NA non-coding downstream 911 37658221 ~ 37658728 (+)
G1734585 NA non-coding downstream 29256 37686566 ~ 37686803 (+)
G1734587 NA non-coding downstream 32557 37689867 ~ 37690069 (+)
G1734588 NA non-coding downstream 33603 37690913 ~ 37691131 (+)
G1734743 NA non-coding downstream 39449 37696759 ~ 37696991 (+)
G1734479 NA other upstream 87992 37565428 ~ 37568953 (+)
G1734420 NA other upstream 285278 37370957 ~ 37371667 (+)
G1733187 NA other upstream 898062 36756989 ~ 36760221 (+)
LOC110500325 ppp2r5b other upstream 1420680 36189389 ~ 36237829 (+)
G1734960 NA other downstream 385781 38043091 ~ 38045066 (+)
G1734961 NA other downstream 387798 38045108 ~ 38046506 (+)
LOC110500301 LOC106609063 other downstream 420241 38076983 ~ 38083972 (+)
arrb2b LOC106608931 other downstream 1210657 38867935 ~ 38939119 (+)

Expression


Co-expression Network