Gene
RNA
| Item | Value |
|---|---|
| gene id | G1734587 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 37689867 ~ 37690069 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1986498 | True | 203 | lncRNA | 0.32 | 1 | 37689867 | 37690069 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500311 | LOC106609056 | coding | upstream | 33715 | 37649502 ~ 37656769 (+) |
| si:dkey-172j4.3 | LOC106609052 | coding | upstream | 152043 | 37430796 ~ 37537824 (+) |
| zgc:109889 | LOC100194703 | coding | upstream | 378627 | 37248296 ~ 37314293 (+) |
| htr2cl1 | LOC106609050 | coding | upstream | 446994 | 37216205 ~ 37242879 (+) |
| LOC110500825 | LOC106609032 | coding | upstream | 933255 | 36666611 ~ 36756612 (+) |
| LOC110500309 | LOC106604291 | coding | downstream | 11372 | 37701441 ~ 37703347 (+) |
| hdac8 | hdac8 | coding | downstream | 31049 | 37721118 ~ 37757590 (+) |
| cited1 | LOC106609035 | coding | downstream | 68690 | 37758759 ~ 37765562 (+) |
| rs4x | rs4x | coding | downstream | 76585 | 37766654 ~ 37772954 (+) |
| LOC118943013 | NA | coding | downstream | 78073 | 37768142 ~ 37768217 (+) |
| G1734585 | NA | non-coding | upstream | 3064 | 37686566 ~ 37686803 (+) |
| G1734551 | NA | non-coding | upstream | 31139 | 37658221 ~ 37658728 (+) |
| G1734553 | NA | non-coding | upstream | 32557 | 37656945 ~ 37657310 (+) |
| G1734550 | NA | non-coding | upstream | 69486 | 37619947 ~ 37620381 (+) |
| G1734588 | NA | non-coding | downstream | 844 | 37690913 ~ 37691131 (+) |
| G1734743 | NA | non-coding | downstream | 6690 | 37696759 ~ 37696991 (+) |
| G1734745 | NA | non-coding | downstream | 9349 | 37699418 ~ 37699937 (+) |
| G1734762 | NA | non-coding | downstream | 26828 | 37716897 ~ 37717213 (+) |
| G1734479 | NA | other | upstream | 120914 | 37565428 ~ 37568953 (+) |
| G1734420 | NA | other | upstream | 318200 | 37370957 ~ 37371667 (+) |
| G1733187 | NA | other | upstream | 930984 | 36756989 ~ 36760221 (+) |
| LOC110500325 | ppp2r5b | other | upstream | 1453602 | 36189389 ~ 36237829 (+) |
| G1734960 | NA | other | downstream | 353022 | 38043091 ~ 38045066 (+) |
| G1734961 | NA | other | downstream | 355039 | 38045108 ~ 38046506 (+) |
| LOC110500301 | LOC106609063 | other | downstream | 387482 | 38076983 ~ 38083972 (+) |
| arrb2b | LOC106608931 | other | downstream | 1177898 | 38867935 ~ 38939119 (+) |
