G1734921


Basic Information

Item Value
gene id G1734921
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 37977100 ~ 37977958 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1986891
gtggagggtatacgcAGGTATAAGCCGTGTACAAAAAACGAATTCAGTGGGCATTGCTTATactcagtggcgattttagCATGTAGCCTATGCAATTGCAAAGCACAGGAAATATATTCACATGCGTGGCGCAGACAGCCTAGTTTCATTTCAGGGGAATATCATCTGCAGACAGCAAGAGTGTGCAGCTCTCAGCTGGttttggcatggagcagctcacagaggAATGACATCGGTAGCCGGTCGGGTAGGAAAGATGTTTCCACTTGTGATGTCTATCAGTAAATTCTAACTAAGGCAACAATGGGTAAGCAAACCAGGTGTTGAAAAAGTTTAGTCCAAAGTGTTGGTTAGTAGGCTATTGGCGATGCACAATTGTCATCATACGCTGTTTGCATAAGGTGTGCAGACATGGATGGGCCTGGGTGGAcagagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1986891 True 436 lncRNA 0.46 2 37977100 37977958

Neighbor

gene id symbol gene type direction distance location
nhsl2 nhsl2 coding upstream 23880 37801058 ~ 37953220 (+)
rs4x rs4x coding upstream 204146 37766654 ~ 37772954 (+)
LOC118943010 NA coding upstream 205653 37771313 ~ 37771447 (+)
LOC118943014 NA coding upstream 207177 37769848 ~ 37769923 (+)
LOC118943013 NA coding upstream 208883 37768142 ~ 37768217 (+)
LOC110500301 LOC106609063 coding downstream 99025 38076983 ~ 38083972 (+)
LOC110500338 LOC106609064 coding downstream 155101 38133059 ~ 38166964 (+)
col4a6 LOC106608923 coding downstream 317472 38295430 ~ 38482345 (+)
ankrd46b ankrd46 coding downstream 505445 38483403 ~ 38496665 (+)
LOC118942926 NA coding downstream 528146 38506104 ~ 38514584 (+)
G1734878 NA non-coding upstream 70320 37906577 ~ 37906780 (+)
G1734877 NA non-coding upstream 72076 37904622 ~ 37905024 (+)
G1734864 NA non-coding upstream 88375 37888524 ~ 37888725 (+)
G1734802 NA non-coding upstream 187319 37789405 ~ 37789781 (+)
cited1 LOC106609035 non-coding upstream 211565 37758759 ~ 37765562 (+)
G1734960 NA non-coding downstream 65133 38043091 ~ 38045066 (+)
G1734963 NA non-coding downstream 69493 38047451 ~ 38047988 (+)
G1734853 NA non-coding downstream 73125 38051083 ~ 38056244 (+)
G1734980 NA non-coding downstream 97796 38075754 ~ 38076214 (+)
G1734981 NA non-coding downstream 98505 38076463 ~ 38076967 (+)
G1734479 NA other upstream 408147 37565428 ~ 37568953 (+)
G1734420 NA other upstream 605433 37370957 ~ 37371667 (+)
zgc:109889 LOC100194703 other upstream 724925 37248296 ~ 37314293 (+)
G1733187 NA other upstream 1218217 36756989 ~ 36760221 (+)
G1734961 NA other downstream 67150 38045108 ~ 38046506 (+)
arrb2b LOC106608931 other downstream 890009 38867935 ~ 38939119 (+)
nat16 LOC106608942 other downstream 1201329 39179147 ~ 39211035 (+)

Expression


Co-expression Network