G1734980


Basic Information

Item Value
gene id G1734980
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 38075754 ~ 38076214 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1986973
gattataacagaacatgaccaagatgttcaaatgttcataaatgaccagcatggtccaataataataaggcagaacagttgaaactggagcagcagcacggccaggtggactggggacagcaaggagtcatcatgtcaggtagtcctggggcatggtcctagggctcaggtcctccgagagagagaaagaaagagagaaaaagagaattagagagagcacacttaaattcacacaggacaccgaataggacaggagaagtactccagatataacagactgaccctagccccccgacacataaactactgcagcataaatactggaggctgagacaggaggggtcaggagacactgtggccccatccgacgacacccccggacagggccaaacaggcaggatataaccccacccactttgccaaagcacagctcccacaccactagagggatatcttcaacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1986973 True 461 lncRNA 0.50 1 38075754 38076214

Neighbor

gene id symbol gene type direction distance location
arhgap36 LOC106609060 coding upstream 24972 37958017 ~ 38050782 (+)
nhsl2 nhsl2 coding upstream 122534 37801058 ~ 37953220 (+)
LOC118943010 NA coding upstream 304307 37771313 ~ 37771447 (+)
LOC118943014 NA coding upstream 305831 37769848 ~ 37769923 (+)
LOC118943013 NA coding upstream 307537 37768142 ~ 37768217 (+)
LOC110500301 LOC106609063 coding downstream 769 38076983 ~ 38083972 (+)
LOC110500338 LOC106609064 coding downstream 56845 38133059 ~ 38166964 (+)
col4a6 LOC106608923 coding downstream 219216 38295430 ~ 38482345 (+)
ankrd46b ankrd46 coding downstream 407189 38483403 ~ 38496665 (+)
LOC118942926 NA coding downstream 429890 38506104 ~ 38514584 (+)
G1734853 NA non-coding upstream 19510 38051083 ~ 38056244 (+)
G1734963 NA non-coding upstream 27766 38047451 ~ 38047988 (+)
G1734960 NA non-coding upstream 30688 38043091 ~ 38045066 (+)
G1734921 NA non-coding upstream 97796 37977100 ~ 37977958 (+)
G1734878 NA non-coding upstream 168974 37906577 ~ 37906780 (+)
G1734981 NA non-coding downstream 249 38076463 ~ 38076967 (+)
G1734959 NA non-coding downstream 11217 38087431 ~ 38088046 (+)
G1734988 NA non-coding downstream 14120 38090334 ~ 38090968 (+)
G1734989 NA non-coding downstream 15772 38091986 ~ 38092225 (+)
G1734990 NA non-coding downstream 17630 38093844 ~ 38094201 (+)
G1734961 NA other upstream 29248 38045108 ~ 38046506 (+)
cited1 LOC106609035 other upstream 312496 37758759 ~ 37765562 (+)
G1734479 NA other upstream 506801 37565428 ~ 37568953 (+)
G1734420 NA other upstream 704087 37370957 ~ 37371667 (+)
arrb2b LOC106608931 other downstream 791753 38867935 ~ 38939119 (+)
nat16 LOC106608942 other downstream 1103073 39179147 ~ 39211035 (+)
G1736098 NA other downstream 1157450 39233664 ~ 39289670 (+)
G1736484 LOC106608963 other downstream 1799542 39875756 ~ 39876950 (+)

Expression


Co-expression Network