G1735004


Basic Information

Item Value
gene id G1735004
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 38112886 ~ 38113534 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1987001
gagtctgcctgccgcccgttaccgttgccccacctctggtttactgacccctgcctgccttgacctgtccattgcctgcccctgttggatgattaaaccattgttaATATTACTGTTGTAATATTGGTTGAGGTTCCTGGGTAGAGACATCCACAATTCCTGGTTTATGGTTATGATGGTGTATTGATGATATAGGTTATGGTTCAACAGGCTAGACGTGAGAGCAGAcatgaggttagggttagcactAGTGCTACTGTAGTAATACTGGTTATGTTAACCATAACCCCGTCCCCTACAGGATAGATATGGTTGCTGACATGGTGAGGTTTCTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1987001 True 336 lncRNA 0.47 2 38112886 38113534

Neighbor

gene id symbol gene type direction distance location
LOC110500301 LOC106609063 coding upstream 28914 38076983 ~ 38083972 (+)
arhgap36 LOC106609060 coding upstream 62104 37958017 ~ 38050782 (+)
nhsl2 nhsl2 coding upstream 159666 37801058 ~ 37953220 (+)
LOC118943010 NA coding upstream 341439 37771313 ~ 37771447 (+)
LOC118943014 NA coding upstream 342963 37769848 ~ 37769923 (+)
LOC110500338 LOC106609064 coding downstream 19525 38133059 ~ 38166964 (+)
col4a6 LOC106608923 coding downstream 181896 38295430 ~ 38482345 (+)
ankrd46b ankrd46 coding downstream 369869 38483403 ~ 38496665 (+)
LOC118942926 NA coding downstream 392570 38506104 ~ 38514584 (+)
LOC110515117 LOC106608926 coding downstream 428845 38542379 ~ 38654406 (+)
G1734990 NA non-coding upstream 18685 38093844 ~ 38094201 (+)
G1734989 NA non-coding upstream 20661 38091986 ~ 38092225 (+)
G1734988 NA non-coding upstream 21918 38090334 ~ 38090968 (+)
G1734959 NA non-coding upstream 24840 38087431 ~ 38088046 (+)
G1734981 NA non-coding upstream 35919 38076463 ~ 38076967 (+)
G1734991 NA non-coding downstream 88768 38202302 ~ 38203063 (+)
G1735056 NA non-coding downstream 113168 38226702 ~ 38227910 (+)
G1735479 NA non-coding downstream 192339 38305873 ~ 38306132 (+)
G1734961 NA other upstream 66380 38045108 ~ 38046506 (+)
G1734960 NA other upstream 67820 38043091 ~ 38045066 (+)
cited1 LOC106609035 other upstream 349628 37758759 ~ 37765562 (+)
G1734479 NA other upstream 543933 37565428 ~ 37568953 (+)
arrb2b LOC106608931 other downstream 754433 38867935 ~ 38939119 (+)
nat16 LOC106608942 other downstream 1065753 39179147 ~ 39211035 (+)
G1736098 NA other downstream 1120130 39233664 ~ 39289670 (+)
G1736484 LOC106608963 other downstream 1762222 39875756 ~ 39876950 (+)
G1737353 NA other downstream 1949172 40062706 ~ 40063325 (+)

Expression


Co-expression Network