Gene
RNA
| Item | Value |
|---|---|
| gene id | G1735056 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 38226702 ~ 38227910 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1987054 | False | 328 | lncRNA | 0.39 | 3 | 38226702 | 38227910 |
| TU1987055 | True | 449 | lncRNA | 0.40 | 3 | 38226928 | 38227910 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500338 | LOC106609064 | coding | upstream | 59738 | 38133059 ~ 38166964 (+) |
| LOC110500301 | LOC106609063 | coding | upstream | 142730 | 38076983 ~ 38083972 (+) |
| arhgap36 | LOC106609060 | coding | upstream | 175920 | 37958017 ~ 38050782 (+) |
| nhsl2 | nhsl2 | coding | upstream | 273482 | 37801058 ~ 37953220 (+) |
| LOC118943010 | NA | coding | upstream | 455255 | 37771313 ~ 37771447 (+) |
| col4a6 | LOC106608923 | coding | downstream | 67520 | 38295430 ~ 38482345 (+) |
| ankrd46b | ankrd46 | coding | downstream | 255493 | 38483403 ~ 38496665 (+) |
| LOC118942926 | NA | coding | downstream | 278194 | 38506104 ~ 38514584 (+) |
| LOC110515117 | LOC106608926 | coding | downstream | 314469 | 38542379 ~ 38654406 (+) |
| LOC110500343 | mtm1 | coding | downstream | 434174 | 38662084 ~ 38720802 (+) |
| G1734991 | NA | non-coding | upstream | 23639 | 38202302 ~ 38203063 (+) |
| G1735004 | NA | non-coding | upstream | 113168 | 38112886 ~ 38113534 (+) |
| G1734990 | NA | non-coding | upstream | 132501 | 38093844 ~ 38094201 (+) |
| G1734989 | NA | non-coding | upstream | 134477 | 38091986 ~ 38092225 (+) |
| G1735479 | NA | non-coding | downstream | 77963 | 38305873 ~ 38306132 (+) |
| G1735483 | NA | non-coding | downstream | 81072 | 38308982 ~ 38309288 (+) |
| G1735466 | NA | non-coding | downstream | 82096 | 38310006 ~ 38310217 (+) |
| G1735507 | NA | non-coding | downstream | 117040 | 38344950 ~ 38345150 (+) |
| G1734961 | NA | other | upstream | 180196 | 38045108 ~ 38046506 (+) |
| G1734960 | NA | other | upstream | 181636 | 38043091 ~ 38045066 (+) |
| cited1 | LOC106609035 | other | upstream | 463444 | 37758759 ~ 37765562 (+) |
| G1734479 | NA | other | upstream | 657749 | 37565428 ~ 37568953 (+) |
| arrb2b | LOC106608931 | other | downstream | 640057 | 38867935 ~ 38939119 (+) |
| nat16 | LOC106608942 | other | downstream | 951377 | 39179147 ~ 39211035 (+) |
| G1736098 | NA | other | downstream | 1005754 | 39233664 ~ 39289670 (+) |
| G1736484 | LOC106608963 | other | downstream | 1647846 | 39875756 ~ 39876950 (+) |
| G1737353 | NA | other | downstream | 1834796 | 40062706 ~ 40063325 (+) |
