G1735483



Basic Information


Item Value
gene id G1735483
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 38308982 ~ 38309288 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1987521
atataattccttctcgcaacaATCTATgccattctcctcctctcaccttttcccttcacttgtggacttcagtgcacaacacatcaagcgaaaaaacctttccaagccaaaccttcatatcataaccgctaaccgctacacacagccaacATCATTGTCACATCATAGTCAGCTAGAACTTCTAGAACTAACACGTTTGTAAACCTACGGCTACATTCATGCAGTGCAGTGTACAGTCAGGaatcagtttagcagttacaccggcgtgtcctggtggcaatacatttataaaaccaaaagcttacct

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1987521 True 307 lncRNA 0.43 1 38308982 38309288

Neighbor


gene id symbol gene type direction distance location
LOC110500338 LOC106609064 coding upstream 142018 38133059 ~ 38166964 (+)
LOC110500301 LOC106609063 coding upstream 225010 38076983 ~ 38083972 (+)
arhgap36 LOC106609060 coding upstream 258200 37958017 ~ 38050782 (+)
nhsl2 nhsl2 coding upstream 355762 37801058 ~ 37953220 (+)
LOC118943010 NA coding upstream 537535 37771313 ~ 37771447 (+)
ankrd46b ankrd46 coding downstream 174115 38483403 ~ 38496665 (+)
LOC118942926 NA coding downstream 196816 38506104 ~ 38514584 (+)
LOC110515117 LOC106608926 coding downstream 233091 38542379 ~ 38654406 (+)
LOC110500343 mtm1 coding downstream 352796 38662084 ~ 38720802 (+)
LOC110500344 LOC106608928 coding downstream 417144 38726432 ~ 38739708 (+)
G1735479 NA non-coding upstream 2850 38305873 ~ 38306132 (+)
col4a6 LOC106608923 non-coding upstream 12770 38295430 ~ 38482345 (+)
G1735056 NA non-coding upstream 81072 38226702 ~ 38227910 (+)
G1734991 NA non-coding upstream 105919 38202302 ~ 38203063 (+)
G1735466 NA non-coding downstream 718 38310006 ~ 38310217 (+)
G1735507 NA non-coding downstream 35662 38344950 ~ 38345150 (+)
G1735560 NA non-coding downstream 134332 38443620 ~ 38446516 (+)
G1735700 NA non-coding downstream 189521 38498809 ~ 38499101 (+)
G1735701 NA non-coding downstream 190086 38499374 ~ 38499584 (+)
G1734961 NA other upstream 262476 38045108 ~ 38046506 (+)
G1734960 NA other upstream 263916 38043091 ~ 38045066 (+)
cited1 LOC106609035 other upstream 545724 37758759 ~ 37765562 (+)
G1734479 NA other upstream 740029 37565428 ~ 37568953 (+)
arrb2b LOC106608931 other downstream 558679 38867935 ~ 38939119 (+)
nat16 LOC106608942 other downstream 869999 39179147 ~ 39211035 (+)
G1736098 NA other downstream 924376 39233664 ~ 39289670 (+)
G1736484 LOC106608963 other downstream 1566468 39875756 ~ 39876950 (+)
G1737353 NA other downstream 1753418 40062706 ~ 40063325 (+)

Expression



Co-expression Network