G1735560


Basic Information

Item Value
gene id G1735560
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 38443620 ~ 38446516 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1987602
gatgtagtgtgtatctgaggtaatcctgtagtttatttgtgttgttgagatgtagtgtgtatctgaggtgatcctgtagtttatttgtgttgttgagatgtagtgtgcatctgaggtgatcctgtagtttatttgtgttgttgagatgtagtgtgcatctgaggtaatcctgtagtttatttgtgttgttgagatgtagtgtgtatctgaggtaatcctgtagtttatttgtgttgttgagatgtagtgtgtatctgaggtaataatgtagtttatttgtgctgttgagatgtagtgtgtatctgaggtaatcctgtagtttatttgtgttgttgagatgtagtgtgtatctgaggtaataatgtagtttatttgtgttgttgagatgtagtgtgcatCTGAGGTGATCCTGTattttatttgtgctgttgagatgtagtgtgtatctggggtaatcctgtagtttatttgtgttgttgagatgtagtgtgtatctgaggtaataatgtagtttatttgtgctgttgagatgtagtgtgtatctgaggtaatcctgtagtttatttgtgctgttgagatgtagtgtgtatctgaggtaataatgtagtttatttgtgttgttgagatgtagtgtgcatctgaggtaataatgtagtttatttgtgctgttgagatgtagtgtgtatctgaggtaataatgtagtttatttgtgctgttgagatgtagtgtgtatctg

Function

NR:

description
PREDICTED: extracellular matrix protein A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1987602 True 737 lncRNA 0.36 2 38443620 38446516

Neighbor

gene id symbol gene type direction distance location
LOC110500338 LOC106609064 coding upstream 276656 38133059 ~ 38166964 (+)
LOC110500301 LOC106609063 coding upstream 359648 38076983 ~ 38083972 (+)
arhgap36 LOC106609060 coding upstream 392838 37958017 ~ 38050782 (+)
nhsl2 nhsl2 coding upstream 490400 37801058 ~ 37953220 (+)
LOC118943010 NA coding upstream 672173 37771313 ~ 37771447 (+)
ankrd46b ankrd46 coding downstream 36887 38483403 ~ 38496665 (+)
LOC118942926 NA coding downstream 59588 38506104 ~ 38514584 (+)
LOC110515117 LOC106608926 coding downstream 95863 38542379 ~ 38654406 (+)
LOC110500343 mtm1 coding downstream 215568 38662084 ~ 38720802 (+)
LOC110500344 LOC106608928 coding downstream 279916 38726432 ~ 38739708 (+)
G1735507 NA non-coding upstream 98470 38344950 ~ 38345150 (+)
G1735466 NA non-coding upstream 133403 38310006 ~ 38310217 (+)
G1735483 NA non-coding upstream 134332 38308982 ~ 38309288 (+)
G1735479 NA non-coding upstream 137488 38305873 ~ 38306132 (+)
col4a6 LOC106608923 non-coding upstream 147408 38295430 ~ 38482345 (+)
G1735700 NA non-coding downstream 52293 38498809 ~ 38499101 (+)
G1735701 NA non-coding downstream 52858 38499374 ~ 38499584 (+)
G1735723 NA non-coding downstream 68716 38515232 ~ 38516261 (+)
G1735756 NA non-coding downstream 99680 38546196 ~ 38546703 (+)
G1735770 NA non-coding downstream 128442 38574958 ~ 38576555 (+)
G1734961 NA other upstream 397114 38045108 ~ 38046506 (+)
G1734960 NA other upstream 398554 38043091 ~ 38045066 (+)
cited1 LOC106609035 other upstream 680362 37758759 ~ 37765562 (+)
G1734479 NA other upstream 874667 37565428 ~ 37568953 (+)
arrb2b LOC106608931 other downstream 421451 38867935 ~ 38939119 (+)
nat16 LOC106608942 other downstream 732771 39179147 ~ 39211035 (+)
G1736098 NA other downstream 787148 39233664 ~ 39289670 (+)
G1736484 LOC106608963 other downstream 1429240 39875756 ~ 39876950 (+)
G1737353 NA other downstream 1616190 40062706 ~ 40063325 (+)

Expression


Co-expression Network