G1735700


Basic Information

Item Value
gene id G1735700
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 38498809 ~ 38499101 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1987748
atatactactgacaacatttctcccaaattccaaataaaaatctaacagcttactacacaacatacacttagtattactttcttagctacagtatacatatctccctggaatattacataatttatgcagcagcatacaatacatttttggactcaccttgtgctgtgctcacttgaacaggaaggtgatgTGGCAGTCCTTCATGGGCAAATGTTGTCcttaaagtctggcattctctggatttatggtgctttcaagacaactgggaactctgaaaaacacaatgTTGAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1987748 True 293 lncRNA 0.37 1 38498809 38499101

Neighbor

gene id symbol gene type direction distance location
ankrd46b ankrd46 coding upstream 2144 38483403 ~ 38496665 (+)
col4a6 LOC106608923 coding upstream 16464 38295430 ~ 38482345 (+)
LOC110500338 LOC106609064 coding upstream 331845 38133059 ~ 38166964 (+)
LOC110500301 LOC106609063 coding upstream 414837 38076983 ~ 38083972 (+)
arhgap36 LOC106609060 coding upstream 448027 37958017 ~ 38050782 (+)
LOC118942926 NA coding downstream 7003 38506104 ~ 38514584 (+)
LOC110515117 LOC106608926 coding downstream 43278 38542379 ~ 38654406 (+)
LOC110500343 mtm1 coding downstream 162983 38662084 ~ 38720802 (+)
LOC110500344 LOC106608928 coding downstream 227331 38726432 ~ 38739708 (+)
hmgb3a LOC106608930 coding downstream 358015 38857116 ~ 38864530 (+)
G1735560 NA non-coding upstream 52293 38443620 ~ 38446516 (+)
G1735507 NA non-coding upstream 153659 38344950 ~ 38345150 (+)
G1735466 NA non-coding upstream 188592 38310006 ~ 38310217 (+)
G1735483 NA non-coding upstream 189521 38308982 ~ 38309288 (+)
G1735479 NA non-coding upstream 192677 38305873 ~ 38306132 (+)
G1735701 NA non-coding downstream 273 38499374 ~ 38499584 (+)
G1735723 NA non-coding downstream 16131 38515232 ~ 38516261 (+)
G1735756 NA non-coding downstream 47095 38546196 ~ 38546703 (+)
G1735770 NA non-coding downstream 75857 38574958 ~ 38576555 (+)
G1735773 NA non-coding downstream 84405 38583506 ~ 38583798 (+)
G1734961 NA other upstream 452303 38045108 ~ 38046506 (+)
G1734960 NA other upstream 453743 38043091 ~ 38045066 (+)
cited1 LOC106609035 other upstream 735551 37758759 ~ 37765562 (+)
G1734479 NA other upstream 929856 37565428 ~ 37568953 (+)
arrb2b LOC106608931 other downstream 368866 38867935 ~ 38939119 (+)
nat16 LOC106608942 other downstream 680186 39179147 ~ 39211035 (+)
G1736098 NA other downstream 734563 39233664 ~ 39289670 (+)
G1736484 LOC106608963 other downstream 1376655 39875756 ~ 39876950 (+)
G1737353 NA other downstream 1563605 40062706 ~ 40063325 (+)

Expression


Co-expression Network