G1735770


Basic Information

Item Value
gene id G1735770
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 38574958 ~ 38576555 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1987820
CTGAGGACTACCCCGTCgttgtgtatgtgtacctttTAGTAACAACACGTGACTGAGGACTACCCCGTCgttgtgtatgtgtacctttTAGTAACAACACGTGACTGAGGACTACCCCGTCgttgtgtatgtgtacctttTAATAACAACACGTGACTGAGGACTACCCCGTCgttgtgtatgtgtacctttTAGTAACAACACGTGACTGAGGACTACCCCGTCgttgtgtatgtgtacctttTAGTAACAACACGTGACTGAGGACTACCCCGTCgttgtgtatgtgtacctttTAATAACAACACGTGACTGAGGACCACCCGGAAAGGTTCTTGTCAGATAAGGTGGCAGGTGAAATGAATACGTTCAGCAGTATTGACGGTGTAGGAAAAACCATCCCATGGCTATTTCCCGCACAACTATTTGATACAGAGCATTTTGACAGTGCTTCTTTTAGAAAACCAGCGATATGTGTCTACAAGCAGTTGTAGCTACAGACACgcatgtctgtctttgtctgtttcagtgtgtttgtgGAATCCCATGTGTTTTCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1987820 True 558 lncRNA 0.45 2 38574958 38576555

Neighbor

gene id symbol gene type direction distance location
LOC118942926 NA coding upstream 60374 38506104 ~ 38514584 (+)
ankrd46b ankrd46 coding upstream 78293 38483403 ~ 38496665 (+)
col4a6 LOC106608923 coding upstream 92613 38295430 ~ 38482345 (+)
LOC110500338 LOC106609064 coding upstream 407994 38133059 ~ 38166964 (+)
LOC110500301 LOC106609063 coding upstream 490986 38076983 ~ 38083972 (+)
LOC110500343 mtm1 coding downstream 85529 38662084 ~ 38720802 (+)
LOC110500344 LOC106608928 coding downstream 149877 38726432 ~ 38739708 (+)
hmgb3a LOC106608930 coding downstream 280561 38857116 ~ 38864530 (+)
arrb2b LOC106608931 coding downstream 291380 38867935 ~ 38939119 (+)
LOC110500354 LOC106608903 coding downstream 379584 38956139 ~ 38982550 (+)
G1735756 NA non-coding upstream 28255 38546196 ~ 38546703 (+)
G1735723 NA non-coding upstream 58697 38515232 ~ 38516261 (+)
G1735701 NA non-coding upstream 75374 38499374 ~ 38499584 (+)
G1735700 NA non-coding upstream 75857 38498809 ~ 38499101 (+)
G1735560 NA non-coding upstream 128442 38443620 ~ 38446516 (+)
G1735773 NA non-coding downstream 6951 38583506 ~ 38583798 (+)
G1735778 NA non-coding downstream 15774 38592329 ~ 38628409 (+)
G1735784 NA non-coding downstream 30635 38607190 ~ 38609125 (+)
G1735795 NA non-coding downstream 51229 38627784 ~ 38628152 (+)
G1735820 NA non-coding downstream 92854 38669409 ~ 38669923 (+)
G1734961 NA other upstream 528452 38045108 ~ 38046506 (+)
G1734960 NA other upstream 529892 38043091 ~ 38045066 (+)
cited1 LOC106609035 other upstream 811700 37758759 ~ 37765562 (+)
G1734479 NA other upstream 1006005 37565428 ~ 37568953 (+)
nat16 LOC106608942 other downstream 602732 39179147 ~ 39211035 (+)
G1736098 NA other downstream 657109 39233664 ~ 39289670 (+)
G1736484 LOC106608963 other downstream 1299201 39875756 ~ 39876950 (+)
G1737353 NA other downstream 1486151 40062706 ~ 40063325 (+)

Expression


Co-expression Network