Gene
RNA
| Item | Value |
|---|---|
| gene id | G1735784 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 38607190 ~ 38609125 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1987844 | False | 306 | lncRNA | 0.31 | 2 | 38607190 | 38609125 |
| TU1987845 | True | 421 | lncRNA | 0.30 | 2 | 38607190 | 38609125 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942926 | NA | coding | upstream | 92606 | 38506104 ~ 38514584 (+) |
| ankrd46b | ankrd46 | coding | upstream | 110525 | 38483403 ~ 38496665 (+) |
| col4a6 | LOC106608923 | coding | upstream | 124845 | 38295430 ~ 38482345 (+) |
| LOC110500338 | LOC106609064 | coding | upstream | 440226 | 38133059 ~ 38166964 (+) |
| LOC110500301 | LOC106609063 | coding | upstream | 523218 | 38076983 ~ 38083972 (+) |
| LOC110500343 | mtm1 | coding | downstream | 52959 | 38662084 ~ 38720802 (+) |
| LOC110500344 | LOC106608928 | coding | downstream | 117307 | 38726432 ~ 38739708 (+) |
| hmgb3a | LOC106608930 | coding | downstream | 247991 | 38857116 ~ 38864530 (+) |
| arrb2b | LOC106608931 | coding | downstream | 258810 | 38867935 ~ 38939119 (+) |
| LOC110500354 | LOC106608903 | coding | downstream | 347014 | 38956139 ~ 38982550 (+) |
| G1735773 | NA | non-coding | upstream | 23392 | 38583506 ~ 38583798 (+) |
| G1735770 | NA | non-coding | upstream | 30635 | 38574958 ~ 38576555 (+) |
| G1735756 | NA | non-coding | upstream | 60487 | 38546196 ~ 38546703 (+) |
| G1735723 | NA | non-coding | upstream | 90929 | 38515232 ~ 38516261 (+) |
| G1735701 | NA | non-coding | upstream | 107606 | 38499374 ~ 38499584 (+) |
| G1735795 | NA | non-coding | downstream | 18659 | 38627784 ~ 38628152 (+) |
| G1735820 | NA | non-coding | downstream | 60284 | 38669409 ~ 38669923 (+) |
| G1735932 | pelp1 | non-coding | downstream | 334053 | 38943178 ~ 38955401 (+) |
| G1735986 | NA | non-coding | downstream | 425384 | 39034509 ~ 39178178 (+) |
| G1734961 | NA | other | upstream | 560684 | 38045108 ~ 38046506 (+) |
| G1734960 | NA | other | upstream | 562124 | 38043091 ~ 38045066 (+) |
| cited1 | LOC106609035 | other | upstream | 843932 | 37758759 ~ 37765562 (+) |
| G1734479 | NA | other | upstream | 1038237 | 37565428 ~ 37568953 (+) |
| nat16 | LOC106608942 | other | downstream | 570162 | 39179147 ~ 39211035 (+) |
| G1736098 | NA | other | downstream | 624539 | 39233664 ~ 39289670 (+) |
| G1736484 | LOC106608963 | other | downstream | 1266631 | 39875756 ~ 39876950 (+) |
| G1737353 | NA | other | downstream | 1453581 | 40062706 ~ 40063325 (+) |
