Gene
RNA
| Item | Value |
|---|---|
| gene id | G1736042 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 39103955 ~ 39105859 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1988147 | True | 489 | lncRNA | 0.38 | 3 | 39103955 | 39105859 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zgc:92664 | LOC106608937 | coding | upstream | 81091 | 39003738 ~ 39022864 (+) |
| alox12 | LOC106608934 | coding | upstream | 117722 | 38969383 ~ 38986233 (+) |
| LOC110500354 | LOC106608903 | coding | upstream | 136078 | 38956139 ~ 38982550 (+) |
| arrb2b | LOC106608931 | coding | upstream | 164836 | 38867935 ~ 38939119 (+) |
| hmgb3a | LOC106608930 | coding | upstream | 239425 | 38857116 ~ 38864530 (+) |
| LOC118942927 | NA | coding | downstream | 32683 | 39138542 ~ 39154522 (+) |
| nat16 | LOC106608942 | coding | downstream | 73288 | 39179147 ~ 39211035 (+) |
| LOC110500362 | LOC106608944 | coding | downstream | 122789 | 39228648 ~ 39237917 (+) |
| nat16l | LOC106608945 | coding | downstream | 139972 | 39245831 ~ 39256597 (+) |
| LOC110500364 | LOC106608946 | coding | downstream | 217006 | 39322865 ~ 39331908 (+) |
| G1735932 | pelp1 | non-coding | upstream | 148554 | 38943178 ~ 38955401 (+) |
| G1735820 | NA | non-coding | upstream | 434032 | 38669409 ~ 38669923 (+) |
| G1735795 | NA | non-coding | upstream | 475803 | 38627784 ~ 38628152 (+) |
| G1735784 | NA | non-coding | upstream | 494830 | 38607190 ~ 38609125 (+) |
| G1736065 | NA | non-coding | downstream | 37851 | 39143710 ~ 39144316 (+) |
| G1736093 | NA | non-coding | downstream | 85583 | 39191442 ~ 39191854 (+) |
| G1736133 | NA | non-coding | downstream | 190203 | 39296062 ~ 39302368 (+) |
| G1736154 | ap1s1 | non-coding | downstream | 234779 | 39340638 ~ 39362957 (+) |
| LOC110500301 | LOC106609063 | other | upstream | 1021681 | 38076983 ~ 38083972 (+) |
| G1734961 | NA | other | upstream | 1057449 | 38045108 ~ 38046506 (+) |
| G1734960 | NA | other | upstream | 1058889 | 38043091 ~ 38045066 (+) |
| cited1 | LOC106609035 | other | upstream | 1340697 | 37758759 ~ 37765562 (+) |
| G1736098 | NA | other | downstream | 127805 | 39233664 ~ 39289670 (+) |
| G1736484 | LOC106608963 | other | downstream | 769897 | 39875756 ~ 39876950 (+) |
| G1737353 | NA | other | downstream | 956847 | 40062706 ~ 40063325 (+) |
| LOC110500409 | LOC106599480 | other | downstream | 1295645 | 40401452 ~ 40404840 (+) |
